Gene : Eucgr.F04135 E. grandis v2.0
Defline:  (1 of 1) PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  3681
Name:  ? Eucgr.F04135 Secondary Identifier:  ? PAC:32053324
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04135 0.5kb upstream 0.5kb upstream 4219 true Chr06: 52029273-52033491 Eucalyptus grandis
Eucgr.F04135 0.5kb upstream 0.5kb upstream 500 false Chr06: 52029273-52029772 Eucalyptus grandis
Eucgr.F04135 0.5kb downstream 0.5kb downstream 4219 true Chr06: 52029773-52033991 Eucalyptus grandis
Eucgr.F04135 0.5kb downstream 0.5kb downstream 500 false Chr06: 52033492-52033991 Eucalyptus grandis
Eucgr.F04135 1.0kb upstream 1.0kb upstream 4719 true Chr06: 52028773-52033491 Eucalyptus grandis
Eucgr.F04135 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52028773-52029772 Eucalyptus grandis
Eucgr.F04135 1.0kb downstream 1.0kb downstream 4719 true Chr06: 52029773-52034491 Eucalyptus grandis
Eucgr.F04135 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52033492-52034491 Eucalyptus grandis
Eucgr.F04135 2.0kb upstream 2.0kb upstream 5719 true Chr06: 52027773-52033491 Eucalyptus grandis
Eucgr.F04135 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52027773-52029772 Eucalyptus grandis
Eucgr.F04135 2.0kb downstream 2.0kb downstream 5719 true Chr06: 52029773-52035491 Eucalyptus grandis
Eucgr.F04135 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52033492-52035491 Eucalyptus grandis
Eucgr.F04135 5.0kb upstream 5.0kb upstream 8719 true Chr06: 52024773-52033491 Eucalyptus grandis
Eucgr.F04135 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52024773-52029772 Eucalyptus grandis
Eucgr.F04135 5.0kb downstream 5.0kb downstream 8719 true Chr06: 52029773-52038491 Eucalyptus grandis
Eucgr.F04135 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52033492-52038491 Eucalyptus grandis
Eucgr.F04135 10.0kb upstream 10.0kb upstream 13719 true Chr06: 52019773-52033491 Eucalyptus grandis
Eucgr.F04135 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52019773-52029772 Eucalyptus grandis
Eucgr.F04135 10.0kb downstream 10.0kb downstream 13719 true Chr06: 52029773-52043491 Eucalyptus grandis
Eucgr.F04135 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52033492-52043491 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041187 5273 Angiosperm View MSA
124060703 5270 Rosid View MSA
123740404 5271 Pentapetalae View MSA
122791763 5272 Eudicot View MSA
121344159 5274 Embryophyte View MSA
123425715 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.33388 0.0 3.67521    
cufflinks 0.975846 0.0 2.76373    
cufflinks 1.98876 0.0 5.26057    
cufflinks 0.597004 0.0 1.78224   Low
cufflinks 1.3534 0.0 3.71137    
cufflinks 5.00218 0.0 12.1342   High

0 Strain