Gene : Eucgr.F04144 E. grandis v2.0
Defline:  (1 of 4) PTHR19432:SF38 - SUCROSE TRANSPORT PROTEIN SUC1-RELATED Genomic Order:  3689
Name:  ? Eucgr.F04144 Secondary Identifier:  ? PAC:32055746
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04144 0.5kb upstream 0.5kb upstream 4415 true Chr06: 52143610-52148024 Eucalyptus grandis
Eucgr.F04144 0.5kb upstream 0.5kb upstream 500 false Chr06: 52143610-52144109 Eucalyptus grandis
Eucgr.F04144 0.5kb downstream 0.5kb downstream 4415 true Chr06: 52144110-52148524 Eucalyptus grandis
Eucgr.F04144 0.5kb downstream 0.5kb downstream 500 false Chr06: 52148025-52148524 Eucalyptus grandis
Eucgr.F04144 1.0kb upstream 1.0kb upstream 4915 true Chr06: 52143110-52148024 Eucalyptus grandis
Eucgr.F04144 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52143110-52144109 Eucalyptus grandis
Eucgr.F04144 1.0kb downstream 1.0kb downstream 4915 true Chr06: 52144110-52149024 Eucalyptus grandis
Eucgr.F04144 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52148025-52149024 Eucalyptus grandis
Eucgr.F04144 2.0kb upstream 2.0kb upstream 5915 true Chr06: 52142110-52148024 Eucalyptus grandis
Eucgr.F04144 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52142110-52144109 Eucalyptus grandis
Eucgr.F04144 2.0kb downstream 2.0kb downstream 5915 true Chr06: 52144110-52150024 Eucalyptus grandis
Eucgr.F04144 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52148025-52150024 Eucalyptus grandis
Eucgr.F04144 5.0kb upstream 5.0kb upstream 8915 true Chr06: 52139110-52148024 Eucalyptus grandis
Eucgr.F04144 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52139110-52144109 Eucalyptus grandis
Eucgr.F04144 5.0kb downstream 5.0kb downstream 8915 true Chr06: 52144110-52153024 Eucalyptus grandis
Eucgr.F04144 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52148025-52153024 Eucalyptus grandis
Eucgr.F04144 10.0kb upstream 10.0kb upstream 13915 true Chr06: 52134110-52148024 Eucalyptus grandis
Eucgr.F04144 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52134110-52144109 Eucalyptus grandis
Eucgr.F04144 10.0kb downstream 10.0kb downstream 13915 true Chr06: 52144110-52158024 Eucalyptus grandis
Eucgr.F04144 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52148025-52158024 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066357 5270 Rosid View MSA
123752867 5271 Pentapetalae View MSA
122774831 5272 Eudicot View MSA
122050885 5273 Angiosperm View MSA
121349366 5274 Embryophyte View MSA
123381287 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.643642 0.0 2.0024    
cufflinks 2.11707 0.0 5.82176    
cufflinks 0.267054 0.0 0.94834 Low Low
cufflinks 0.713073 0.0 2.23447    
cufflinks 11.8517 0.0 27.5419   High
cufflinks 1.87757 0.0 5.15897    

0 Strain