Gene : Eucgr.G00575 E. grandis v2.0
Defline:  (1 of 1) KOG4438 - Centromere-associated protein NUF2 Genomic Order:  315
Name:  ? Eucgr.G00575 Secondary Identifier:  ? PAC:32072444
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00575 0.5kb upstream 0.5kb upstream 10540 true Chr07: 8478229-8488768 Eucalyptus grandis
Eucgr.G00575 0.5kb upstream 0.5kb upstream 500 false Chr07: 8488269-8488768 Eucalyptus grandis
Eucgr.G00575 0.5kb downstream 0.5kb downstream 10540 true Chr07: 8477729-8488268 Eucalyptus grandis
Eucgr.G00575 0.5kb downstream 0.5kb downstream 500 false Chr07: 8477729-8478228 Eucalyptus grandis
Eucgr.G00575 1.0kb upstream 1.0kb upstream 11040 true Chr07: 8478229-8489268 Eucalyptus grandis
Eucgr.G00575 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8488269-8489268 Eucalyptus grandis
Eucgr.G00575 1.0kb downstream 1.0kb downstream 11040 true Chr07: 8477229-8488268 Eucalyptus grandis
Eucgr.G00575 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8477229-8478228 Eucalyptus grandis
Eucgr.G00575 2.0kb upstream 2.0kb upstream 12040 true Chr07: 8478229-8490268 Eucalyptus grandis
Eucgr.G00575 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8488269-8490268 Eucalyptus grandis
Eucgr.G00575 2.0kb downstream 2.0kb downstream 12040 true Chr07: 8476229-8488268 Eucalyptus grandis
Eucgr.G00575 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8476229-8478228 Eucalyptus grandis
Eucgr.G00575 5.0kb upstream 5.0kb upstream 15040 true Chr07: 8478229-8493268 Eucalyptus grandis
Eucgr.G00575 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8488269-8493268 Eucalyptus grandis
Eucgr.G00575 5.0kb downstream 5.0kb downstream 15040 true Chr07: 8473229-8488268 Eucalyptus grandis
Eucgr.G00575 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8473229-8478228 Eucalyptus grandis
Eucgr.G00575 10.0kb upstream 10.0kb upstream 20040 true Chr07: 8478229-8498268 Eucalyptus grandis
Eucgr.G00575 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8488269-8498268 Eucalyptus grandis
Eucgr.G00575 10.0kb downstream 10.0kb downstream 20040 true Chr07: 8468229-8488268 Eucalyptus grandis
Eucgr.G00575 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8468229-8478228 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070020 5270 Rosid View MSA
123741477 5271 Pentapetalae View MSA
122794633 5272 Eudicot View MSA
122050952 5273 Angiosperm View MSA
121351685 5274 Embryophyte View MSA
123425820 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.87349 0.0 9.66405    
cufflinks 4.57624 0.0 11.192   High
cufflinks 3.29301 0.0 8.32178    
cufflinks 2.3838 0.0 6.21367   Low
cufflinks 3.1887 0.0 8.10422    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain