Gene : Eucgr.G00473 E. grandis v2.0
Defline:  (1 of 4) PTHR11088:SF30 - ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTIC Genomic Order:  1220
Name:  ? Eucgr.G00473 Secondary Identifier:  ? PAC:32070993
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2681 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00473 0.5kb upstream 0.5kb upstream 1268 true Chr07: 29579270-29580537 Eucalyptus grandis
Eucgr.G00473 0.5kb upstream 0.5kb upstream 500 false Chr07: 29580038-29580537 Eucalyptus grandis
Eucgr.G00473 0.5kb downstream 0.5kb downstream 1268 true Chr07: 29578770-29580037 Eucalyptus grandis
Eucgr.G00473 0.5kb downstream 0.5kb downstream 500 false Chr07: 29578770-29579269 Eucalyptus grandis
Eucgr.G00473 1.0kb upstream 1.0kb upstream 1768 true Chr07: 29579270-29581037 Eucalyptus grandis
Eucgr.G00473 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29580038-29581037 Eucalyptus grandis
Eucgr.G00473 1.0kb downstream 1.0kb downstream 1768 true Chr07: 29578270-29580037 Eucalyptus grandis
Eucgr.G00473 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29578270-29579269 Eucalyptus grandis
Eucgr.G00473 2.0kb upstream 2.0kb upstream 2768 true Chr07: 29579270-29582037 Eucalyptus grandis
Eucgr.G00473 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29580038-29582037 Eucalyptus grandis
Eucgr.G00473 2.0kb downstream 2.0kb downstream 2768 true Chr07: 29577270-29580037 Eucalyptus grandis
Eucgr.G00473 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29577270-29579269 Eucalyptus grandis
Eucgr.G00473 5.0kb upstream 5.0kb upstream 5768 true Chr07: 29579270-29585037 Eucalyptus grandis
Eucgr.G00473 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29580038-29585037 Eucalyptus grandis
Eucgr.G00473 5.0kb downstream 5.0kb downstream 5768 true Chr07: 29574270-29580037 Eucalyptus grandis
Eucgr.G00473 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29574270-29579269 Eucalyptus grandis
Eucgr.G00473 10.0kb upstream 10.0kb upstream 10768 true Chr07: 29579270-29590037 Eucalyptus grandis
Eucgr.G00473 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29580038-29590037 Eucalyptus grandis
Eucgr.G00473 10.0kb downstream 10.0kb downstream 10768 true Chr07: 29569270-29580037 Eucalyptus grandis
Eucgr.G00473 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29569270-29579269 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050703 5270 Rosid View MSA
123755312 5271 Pentapetalae View MSA
122796048 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain