Gene : Eucgr.G00381 E. grandis v2.0
Defline:  (1 of 3) PTHR15245:SF11 - PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE Genomic Order:  222
Name:  ? Eucgr.G00381 Secondary Identifier:  ? PAC:32070058
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6351 Eucalyptus grandis pathologic  
Egrandis PWY-6352 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00381 0.5kb upstream 0.5kb upstream 2372 true Chr07: 6445319-6447690 Eucalyptus grandis
Eucgr.G00381 0.5kb upstream 0.5kb upstream 500 false Chr07: 6445319-6445818 Eucalyptus grandis
Eucgr.G00381 0.5kb downstream 0.5kb downstream 2372 true Chr07: 6445819-6448190 Eucalyptus grandis
Eucgr.G00381 0.5kb downstream 0.5kb downstream 500 false Chr07: 6447691-6448190 Eucalyptus grandis
Eucgr.G00381 1.0kb upstream 1.0kb upstream 2872 true Chr07: 6444819-6447690 Eucalyptus grandis
Eucgr.G00381 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6444819-6445818 Eucalyptus grandis
Eucgr.G00381 1.0kb downstream 1.0kb downstream 2872 true Chr07: 6445819-6448690 Eucalyptus grandis
Eucgr.G00381 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6447691-6448690 Eucalyptus grandis
Eucgr.G00381 2.0kb upstream 2.0kb upstream 3872 true Chr07: 6443819-6447690 Eucalyptus grandis
Eucgr.G00381 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6443819-6445818 Eucalyptus grandis
Eucgr.G00381 2.0kb downstream 2.0kb downstream 3872 true Chr07: 6445819-6449690 Eucalyptus grandis
Eucgr.G00381 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6447691-6449690 Eucalyptus grandis
Eucgr.G00381 5.0kb upstream 5.0kb upstream 6872 true Chr07: 6440819-6447690 Eucalyptus grandis
Eucgr.G00381 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6440819-6445818 Eucalyptus grandis
Eucgr.G00381 5.0kb downstream 5.0kb downstream 6872 true Chr07: 6445819-6452690 Eucalyptus grandis
Eucgr.G00381 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6447691-6452690 Eucalyptus grandis
Eucgr.G00381 10.0kb upstream 10.0kb upstream 11872 true Chr07: 6435819-6447690 Eucalyptus grandis
Eucgr.G00381 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6435819-6445818 Eucalyptus grandis
Eucgr.G00381 10.0kb downstream 10.0kb downstream 11872 true Chr07: 6445819-6457690 Eucalyptus grandis
Eucgr.G00381 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6447691-6457690 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068330 5270 Rosid View MSA
123741800 5271 Pentapetalae View MSA
122793394 5272 Eudicot View MSA
122050959 5273 Angiosperm View MSA
121351687 5274 Embryophyte View MSA
123427554 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.06819E-4 0.0 0.0120093 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00269423 0.0 0.0443482 Low  
cufflinks 8.82144E-5 0.0 0.00759753 Low Low
cufflinks 0.231034 0.0 0.780267 Low High
cufflinks 0.00277721 0.0 0.0480678 Low  

0 Strain