Gene : Eucgr.G00400 E. grandis v2.0
Defline:  (1 of 3) PTHR11203:SF11 - CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 3 Genomic Order:  236
Name:  ? Eucgr.G00400 Secondary Identifier:  ? PAC:32072580
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00400 0.5kb upstream 0.5kb upstream 4559 true Chr07: 6624371-6628929 Eucalyptus grandis
Eucgr.G00400 0.5kb upstream 0.5kb upstream 500 false Chr07: 6628430-6628929 Eucalyptus grandis
Eucgr.G00400 0.5kb downstream 0.5kb downstream 4559 true Chr07: 6623871-6628429 Eucalyptus grandis
Eucgr.G00400 0.5kb downstream 0.5kb downstream 500 false Chr07: 6623871-6624370 Eucalyptus grandis
Eucgr.G00400 1.0kb upstream 1.0kb upstream 5059 true Chr07: 6624371-6629429 Eucalyptus grandis
Eucgr.G00400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6628430-6629429 Eucalyptus grandis
Eucgr.G00400 1.0kb downstream 1.0kb downstream 5059 true Chr07: 6623371-6628429 Eucalyptus grandis
Eucgr.G00400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6623371-6624370 Eucalyptus grandis
Eucgr.G00400 2.0kb upstream 2.0kb upstream 6059 true Chr07: 6624371-6630429 Eucalyptus grandis
Eucgr.G00400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6628430-6630429 Eucalyptus grandis
Eucgr.G00400 2.0kb downstream 2.0kb downstream 6059 true Chr07: 6622371-6628429 Eucalyptus grandis
Eucgr.G00400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6622371-6624370 Eucalyptus grandis
Eucgr.G00400 5.0kb upstream 5.0kb upstream 9059 true Chr07: 6624371-6633429 Eucalyptus grandis
Eucgr.G00400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6628430-6633429 Eucalyptus grandis
Eucgr.G00400 5.0kb downstream 5.0kb downstream 9059 true Chr07: 6619371-6628429 Eucalyptus grandis
Eucgr.G00400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6619371-6624370 Eucalyptus grandis
Eucgr.G00400 10.0kb upstream 10.0kb upstream 14059 true Chr07: 6624371-6638429 Eucalyptus grandis
Eucgr.G00400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6628430-6638429 Eucalyptus grandis
Eucgr.G00400 10.0kb downstream 10.0kb downstream 14059 true Chr07: 6614371-6628429 Eucalyptus grandis
Eucgr.G00400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6614371-6624370 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069144 5270 Rosid View MSA
123737770 5271 Pentapetalae View MSA
122787624 5272 Eudicot View MSA
122043223 5273 Angiosperm View MSA
121344994 5274 Embryophyte View MSA
123426215 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.28516 0.0 5.84674    
cufflinks 1.41342 0.0 3.76007    
cufflinks 3.16697 0.0 7.80033   High
cufflinks 0.65308 0.0 1.87571   Low
cufflinks 1.25277 0.0 3.38322    
cufflinks 2.62732 0.0 6.66524    

0 Strain