Gene : Eucgr.G00289 E. grandis v2.0
Defline:  (1 of 17) PTHR10366//PTHR10366:SF332 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  159
Name:  ? Eucgr.G00289 Secondary Identifier:  ? PAC:32072286
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00289 0.5kb upstream 0.5kb upstream 2932 true Chr07: 4418542-4421473 Eucalyptus grandis
Eucgr.G00289 0.5kb upstream 0.5kb upstream 500 false Chr07: 4420974-4421473 Eucalyptus grandis
Eucgr.G00289 0.5kb downstream 0.5kb downstream 2932 true Chr07: 4418042-4420973 Eucalyptus grandis
Eucgr.G00289 0.5kb downstream 0.5kb downstream 500 false Chr07: 4418042-4418541 Eucalyptus grandis
Eucgr.G00289 1.0kb upstream 1.0kb upstream 3432 true Chr07: 4418542-4421973 Eucalyptus grandis
Eucgr.G00289 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4420974-4421973 Eucalyptus grandis
Eucgr.G00289 1.0kb downstream 1.0kb downstream 3432 true Chr07: 4417542-4420973 Eucalyptus grandis
Eucgr.G00289 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4417542-4418541 Eucalyptus grandis
Eucgr.G00289 2.0kb upstream 2.0kb upstream 4432 true Chr07: 4418542-4422973 Eucalyptus grandis
Eucgr.G00289 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4420974-4422973 Eucalyptus grandis
Eucgr.G00289 2.0kb downstream 2.0kb downstream 4432 true Chr07: 4416542-4420973 Eucalyptus grandis
Eucgr.G00289 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4416542-4418541 Eucalyptus grandis
Eucgr.G00289 5.0kb upstream 5.0kb upstream 7432 true Chr07: 4418542-4425973 Eucalyptus grandis
Eucgr.G00289 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4420974-4425973 Eucalyptus grandis
Eucgr.G00289 5.0kb downstream 5.0kb downstream 7432 true Chr07: 4413542-4420973 Eucalyptus grandis
Eucgr.G00289 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4413542-4418541 Eucalyptus grandis
Eucgr.G00289 10.0kb upstream 10.0kb upstream 12432 true Chr07: 4418542-4430973 Eucalyptus grandis
Eucgr.G00289 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4420974-4430973 Eucalyptus grandis
Eucgr.G00289 10.0kb downstream 10.0kb downstream 12432 true Chr07: 4408542-4420973 Eucalyptus grandis
Eucgr.G00289 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4408542-4418541 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072658 5270 Rosid View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.229651 0.0 0.858724 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.438333 0.0 1.5045    
cufflinks 0.643104 0.0 2.09161    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain