Gene : Eucgr.G00076 E. grandis v2.0
Defline:  (1 of 1) PTHR31384:SF28 - AUXIN RESPONSE FACTOR 1 Genomic Order:  57
Name:  ? Eucgr.G00076 Secondary Identifier:  ? PAC:32071490
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00076 0.5kb upstream 0.5kb upstream 12340 true Chr07: 847748-860087 Eucalyptus grandis
Eucgr.G00076 0.5kb upstream 0.5kb upstream 500 false Chr07: 847748-848247 Eucalyptus grandis
Eucgr.G00076 0.5kb downstream 0.5kb downstream 12340 true Chr07: 848248-860587 Eucalyptus grandis
Eucgr.G00076 0.5kb downstream 0.5kb downstream 500 false Chr07: 860088-860587 Eucalyptus grandis
Eucgr.G00076 1.0kb upstream 1.0kb upstream 12840 true Chr07: 847248-860087 Eucalyptus grandis
Eucgr.G00076 1.0kb upstream 1.0kb upstream 1000 false Chr07: 847248-848247 Eucalyptus grandis
Eucgr.G00076 1.0kb downstream 1.0kb downstream 12840 true Chr07: 848248-861087 Eucalyptus grandis
Eucgr.G00076 1.0kb downstream 1.0kb downstream 1000 false Chr07: 860088-861087 Eucalyptus grandis
Eucgr.G00076 2.0kb upstream 2.0kb upstream 13840 true Chr07: 846248-860087 Eucalyptus grandis
Eucgr.G00076 2.0kb upstream 2.0kb upstream 2000 false Chr07: 846248-848247 Eucalyptus grandis
Eucgr.G00076 2.0kb downstream 2.0kb downstream 13840 true Chr07: 848248-862087 Eucalyptus grandis
Eucgr.G00076 2.0kb downstream 2.0kb downstream 2000 false Chr07: 860088-862087 Eucalyptus grandis
Eucgr.G00076 5.0kb upstream 5.0kb upstream 16840 true Chr07: 843248-860087 Eucalyptus grandis
Eucgr.G00076 5.0kb upstream 5.0kb upstream 5000 false Chr07: 843248-848247 Eucalyptus grandis
Eucgr.G00076 5.0kb downstream 5.0kb downstream 16840 true Chr07: 848248-865087 Eucalyptus grandis
Eucgr.G00076 5.0kb downstream 5.0kb downstream 5000 false Chr07: 860088-865087 Eucalyptus grandis
Eucgr.G00076 10.0kb upstream 10.0kb upstream 21840 true Chr07: 838248-860087 Eucalyptus grandis
Eucgr.G00076 10.0kb upstream 10.0kb upstream 10000 false Chr07: 838248-848247 Eucalyptus grandis
Eucgr.G00076 10.0kb downstream 10.0kb downstream 21840 true Chr07: 848248-870087 Eucalyptus grandis
Eucgr.G00076 10.0kb downstream 10.0kb downstream 10000 false Chr07: 860088-870087 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069092 5270 Rosid View MSA
123739292 5271 Pentapetalae View MSA
122788624 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.6713 0.0 121.395 High Low
cufflinks 83.8471 0.0 242.897 High  
cufflinks 52.4247 0.0 160.775 High  
cufflinks 96.3256 0.0 310.212 High High
cufflinks 65.8023 0.0 179.626 High  
cufflinks 58.6064 0.0 133.825 High  

0 Strain