Gene : Eucgr.G00054 E. grandis v2.0
Defline:  (1 of 162) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  40
Name:  ? Eucgr.G00054 Secondary Identifier:  ? PAC:32073215
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00054 0.5kb upstream 0.5kb upstream 3032 true Chr07: 560847-563878 Eucalyptus grandis
Eucgr.G00054 0.5kb upstream 0.5kb upstream 500 false Chr07: 560847-561346 Eucalyptus grandis
Eucgr.G00054 0.5kb downstream 0.5kb downstream 3032 true Chr07: 561347-564378 Eucalyptus grandis
Eucgr.G00054 0.5kb downstream 0.5kb downstream 500 false Chr07: 563879-564378 Eucalyptus grandis
Eucgr.G00054 1.0kb upstream 1.0kb upstream 3532 true Chr07: 560347-563878 Eucalyptus grandis
Eucgr.G00054 1.0kb upstream 1.0kb upstream 1000 false Chr07: 560347-561346 Eucalyptus grandis
Eucgr.G00054 1.0kb downstream 1.0kb downstream 3532 true Chr07: 561347-564878 Eucalyptus grandis
Eucgr.G00054 1.0kb downstream 1.0kb downstream 1000 false Chr07: 563879-564878 Eucalyptus grandis
Eucgr.G00054 2.0kb upstream 2.0kb upstream 4532 true Chr07: 559347-563878 Eucalyptus grandis
Eucgr.G00054 2.0kb upstream 2.0kb upstream 2000 false Chr07: 559347-561346 Eucalyptus grandis
Eucgr.G00054 2.0kb downstream 2.0kb downstream 4532 true Chr07: 561347-565878 Eucalyptus grandis
Eucgr.G00054 2.0kb downstream 2.0kb downstream 2000 false Chr07: 563879-565878 Eucalyptus grandis
Eucgr.G00054 5.0kb upstream 5.0kb upstream 7532 true Chr07: 556347-563878 Eucalyptus grandis
Eucgr.G00054 5.0kb upstream 5.0kb upstream 5000 false Chr07: 556347-561346 Eucalyptus grandis
Eucgr.G00054 5.0kb downstream 5.0kb downstream 7532 true Chr07: 561347-568878 Eucalyptus grandis
Eucgr.G00054 5.0kb downstream 5.0kb downstream 5000 false Chr07: 563879-568878 Eucalyptus grandis
Eucgr.G00054 10.0kb upstream 10.0kb upstream 12532 true Chr07: 551347-563878 Eucalyptus grandis
Eucgr.G00054 10.0kb upstream 10.0kb upstream 10000 false Chr07: 551347-561346 Eucalyptus grandis
Eucgr.G00054 10.0kb downstream 10.0kb downstream 12532 true Chr07: 561347-573878 Eucalyptus grandis
Eucgr.G00054 10.0kb downstream 10.0kb downstream 10000 false Chr07: 563879-573878 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061358 5270 Rosid View MSA
123741479 5271 Pentapetalae View MSA
122788973 5272 Eudicot View MSA
122049056 5273 Angiosperm View MSA
121351099 5274 Embryophyte View MSA
123382006 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.65384 0.0 22.3878    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.35837 0.0 3.82032    
cufflinks 0.130788 0.0 0.492774 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.49404 0.0 22.0192    

0 Strain