Gene : Eucgr.G00022 E. grandis v2.0
Defline:  (1 of 4) 2.3.1.135 - Phosphatidylcholine--retinol O-acyltransferase / Retinyl ester synthase Genomic Order:  14
Name:  ? Eucgr.G00022 Secondary Identifier:  ? PAC:32072551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00022 0.5kb upstream 0.5kb upstream 2403 true Chr07: 214148-216550 Eucalyptus grandis
Eucgr.G00022 0.5kb upstream 0.5kb upstream 500 false Chr07: 214148-214647 Eucalyptus grandis
Eucgr.G00022 0.5kb downstream 0.5kb downstream 2403 true Chr07: 214648-217050 Eucalyptus grandis
Eucgr.G00022 0.5kb downstream 0.5kb downstream 500 false Chr07: 216551-217050 Eucalyptus grandis
Eucgr.G00022 1.0kb upstream 1.0kb upstream 2903 true Chr07: 213648-216550 Eucalyptus grandis
Eucgr.G00022 1.0kb upstream 1.0kb upstream 1000 false Chr07: 213648-214647 Eucalyptus grandis
Eucgr.G00022 1.0kb downstream 1.0kb downstream 2903 true Chr07: 214648-217550 Eucalyptus grandis
Eucgr.G00022 1.0kb downstream 1.0kb downstream 1000 false Chr07: 216551-217550 Eucalyptus grandis
Eucgr.G00022 2.0kb upstream 2.0kb upstream 3903 true Chr07: 212648-216550 Eucalyptus grandis
Eucgr.G00022 2.0kb upstream 2.0kb upstream 2000 false Chr07: 212648-214647 Eucalyptus grandis
Eucgr.G00022 2.0kb downstream 2.0kb downstream 3903 true Chr07: 214648-218550 Eucalyptus grandis
Eucgr.G00022 2.0kb downstream 2.0kb downstream 2000 false Chr07: 216551-218550 Eucalyptus grandis
Eucgr.G00022 5.0kb upstream 5.0kb upstream 6903 true Chr07: 209648-216550 Eucalyptus grandis
Eucgr.G00022 5.0kb upstream 5.0kb upstream 5000 false Chr07: 209648-214647 Eucalyptus grandis
Eucgr.G00022 5.0kb downstream 5.0kb downstream 6903 true Chr07: 214648-221550 Eucalyptus grandis
Eucgr.G00022 5.0kb downstream 5.0kb downstream 5000 false Chr07: 216551-221550 Eucalyptus grandis
Eucgr.G00022 10.0kb upstream 10.0kb upstream 11903 true Chr07: 204648-216550 Eucalyptus grandis
Eucgr.G00022 10.0kb upstream 10.0kb upstream 10000 false Chr07: 204648-214647 Eucalyptus grandis
Eucgr.G00022 10.0kb downstream 10.0kb downstream 11903 true Chr07: 214648-226550 Eucalyptus grandis
Eucgr.G00022 10.0kb downstream 10.0kb downstream 10000 false Chr07: 216551-226550 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061473 5270 Rosid View MSA
123736529 5271 Pentapetalae View MSA
122788305 5272 Eudicot View MSA
122041742 5273 Angiosperm View MSA
121351388 5274 Embryophyte View MSA
123382148 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0628 0.0 36.5377    
cufflinks 55.4999 0.0 123.135 High High
cufflinks 10.7038 0.0 25.1085   Low
cufflinks 39.7005 0.0 87.795 High  
cufflinks 25.7308 0.0 57.2296    
cufflinks 13.4966 0.0 31.1037    

0 Strain