Gene : Eucgr.G01176 E. grandis v2.0
Defline:  (1 of 4) 6.3.5.7 - Glutaminyl-tRNA synthase (glutamine-hydrolyzing) / Glutamyl-tRNA(Gln) amidotransferase Genomic Order:  780
Name:  ? Eucgr.G01176 Secondary Identifier:  ? PAC:32070987
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5921 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01176 0.5kb upstream 0.5kb upstream 9082 true Chr07: 17991440-18000521 Eucalyptus grandis
Eucgr.G01176 0.5kb upstream 0.5kb upstream 500 false Chr07: 17991440-17991939 Eucalyptus grandis
Eucgr.G01176 0.5kb downstream 0.5kb downstream 9082 true Chr07: 17991940-18001021 Eucalyptus grandis
Eucgr.G01176 0.5kb downstream 0.5kb downstream 500 false Chr07: 18000522-18001021 Eucalyptus grandis
Eucgr.G01176 1.0kb upstream 1.0kb upstream 9582 true Chr07: 17990940-18000521 Eucalyptus grandis
Eucgr.G01176 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17990940-17991939 Eucalyptus grandis
Eucgr.G01176 1.0kb downstream 1.0kb downstream 9582 true Chr07: 17991940-18001521 Eucalyptus grandis
Eucgr.G01176 1.0kb downstream 1.0kb downstream 1000 false Chr07: 18000522-18001521 Eucalyptus grandis
Eucgr.G01176 2.0kb upstream 2.0kb upstream 10582 true Chr07: 17989940-18000521 Eucalyptus grandis
Eucgr.G01176 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17989940-17991939 Eucalyptus grandis
Eucgr.G01176 2.0kb downstream 2.0kb downstream 10582 true Chr07: 17991940-18002521 Eucalyptus grandis
Eucgr.G01176 2.0kb downstream 2.0kb downstream 2000 false Chr07: 18000522-18002521 Eucalyptus grandis
Eucgr.G01176 5.0kb upstream 5.0kb upstream 13582 true Chr07: 17986940-18000521 Eucalyptus grandis
Eucgr.G01176 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17986940-17991939 Eucalyptus grandis
Eucgr.G01176 5.0kb downstream 5.0kb downstream 13582 true Chr07: 17991940-18005521 Eucalyptus grandis
Eucgr.G01176 5.0kb downstream 5.0kb downstream 5000 false Chr07: 18000522-18005521 Eucalyptus grandis
Eucgr.G01176 10.0kb upstream 10.0kb upstream 18582 true Chr07: 17981940-18000521 Eucalyptus grandis
Eucgr.G01176 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17981940-17991939 Eucalyptus grandis
Eucgr.G01176 10.0kb downstream 10.0kb downstream 18582 true Chr07: 17991940-18010521 Eucalyptus grandis
Eucgr.G01176 10.0kb downstream 10.0kb downstream 10000 false Chr07: 18000522-18010521 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063179 5270 Rosid View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.42111 0.0 24.2011    
cufflinks 11.9011 0.0 29.9665   High
cufflinks 9.43586 0.0 27.4806    
cufflinks 9.65482 0.0 21.7119    
cufflinks 9.58888 0.0 26.7519    
cufflinks 5.80834 0.0 18.5866   Low

0 Strain