Gene : Eucgr.G01116 E. grandis v2.0
Defline:  (1 of 8) PTHR11802//PTHR11802:SF48 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Genomic Order:  729
Name:  ? Eucgr.G01116 Secondary Identifier:  ? PAC:32071250
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01116 0.5kb upstream 0.5kb upstream 5079 true Chr07: 17053539-17058617 Eucalyptus grandis
Eucgr.G01116 0.5kb upstream 0.5kb upstream 500 false Chr07: 17053539-17054038 Eucalyptus grandis
Eucgr.G01116 0.5kb downstream 0.5kb downstream 5079 true Chr07: 17054039-17059117 Eucalyptus grandis
Eucgr.G01116 0.5kb downstream 0.5kb downstream 500 false Chr07: 17058618-17059117 Eucalyptus grandis
Eucgr.G01116 1.0kb upstream 1.0kb upstream 5579 true Chr07: 17053039-17058617 Eucalyptus grandis
Eucgr.G01116 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17053039-17054038 Eucalyptus grandis
Eucgr.G01116 1.0kb downstream 1.0kb downstream 5579 true Chr07: 17054039-17059617 Eucalyptus grandis
Eucgr.G01116 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17058618-17059617 Eucalyptus grandis
Eucgr.G01116 2.0kb upstream 2.0kb upstream 6579 true Chr07: 17052039-17058617 Eucalyptus grandis
Eucgr.G01116 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17052039-17054038 Eucalyptus grandis
Eucgr.G01116 2.0kb downstream 2.0kb downstream 6579 true Chr07: 17054039-17060617 Eucalyptus grandis
Eucgr.G01116 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17058618-17060617 Eucalyptus grandis
Eucgr.G01116 5.0kb upstream 5.0kb upstream 9579 true Chr07: 17049039-17058617 Eucalyptus grandis
Eucgr.G01116 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17049039-17054038 Eucalyptus grandis
Eucgr.G01116 5.0kb downstream 5.0kb downstream 9579 true Chr07: 17054039-17063617 Eucalyptus grandis
Eucgr.G01116 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17058618-17063617 Eucalyptus grandis
Eucgr.G01116 10.0kb upstream 10.0kb upstream 14579 true Chr07: 17044039-17058617 Eucalyptus grandis
Eucgr.G01116 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17044039-17054038 Eucalyptus grandis
Eucgr.G01116 10.0kb downstream 10.0kb downstream 14579 true Chr07: 17054039-17068617 Eucalyptus grandis
Eucgr.G01116 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17058618-17068617 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072277 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.91702 0.0 12.1626    
cufflinks 0.389121 0.0 1.25276 Low  
cufflinks 2.60338 0.0 6.84023    
cufflinks 0.243747 0.0 0.836966 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.21403 0.0 12.8978    

0 Strain