Gene : Eucgr.G01117 E. grandis v2.0
Defline:  (1 of 8) PTHR11802//PTHR11802:SF48 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Genomic Order:  730
Name:  ? Eucgr.G01117 Secondary Identifier:  ? PAC:32071925
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01117 0.5kb upstream 0.5kb upstream 3245 true Chr07: 17062034-17065278 Eucalyptus grandis
Eucgr.G01117 0.5kb upstream 0.5kb upstream 500 false Chr07: 17062034-17062533 Eucalyptus grandis
Eucgr.G01117 0.5kb downstream 0.5kb downstream 3245 true Chr07: 17062534-17065778 Eucalyptus grandis
Eucgr.G01117 0.5kb downstream 0.5kb downstream 500 false Chr07: 17065279-17065778 Eucalyptus grandis
Eucgr.G01117 1.0kb upstream 1.0kb upstream 3745 true Chr07: 17061534-17065278 Eucalyptus grandis
Eucgr.G01117 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17061534-17062533 Eucalyptus grandis
Eucgr.G01117 1.0kb downstream 1.0kb downstream 3745 true Chr07: 17062534-17066278 Eucalyptus grandis
Eucgr.G01117 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17065279-17066278 Eucalyptus grandis
Eucgr.G01117 2.0kb upstream 2.0kb upstream 4745 true Chr07: 17060534-17065278 Eucalyptus grandis
Eucgr.G01117 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17060534-17062533 Eucalyptus grandis
Eucgr.G01117 2.0kb downstream 2.0kb downstream 4745 true Chr07: 17062534-17067278 Eucalyptus grandis
Eucgr.G01117 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17065279-17067278 Eucalyptus grandis
Eucgr.G01117 5.0kb upstream 5.0kb upstream 7745 true Chr07: 17057534-17065278 Eucalyptus grandis
Eucgr.G01117 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17057534-17062533 Eucalyptus grandis
Eucgr.G01117 5.0kb downstream 5.0kb downstream 7745 true Chr07: 17062534-17070278 Eucalyptus grandis
Eucgr.G01117 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17065279-17070278 Eucalyptus grandis
Eucgr.G01117 10.0kb upstream 10.0kb upstream 12745 true Chr07: 17052534-17065278 Eucalyptus grandis
Eucgr.G01117 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17052534-17062533 Eucalyptus grandis
Eucgr.G01117 10.0kb downstream 10.0kb downstream 12745 true Chr07: 17062534-17075278 Eucalyptus grandis
Eucgr.G01117 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17065279-17075278 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072277 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.47367 0.0 6.69592    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.59592 0.0 4.50564    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain