Gene : Eucgr.G01004 E. grandis v2.0
Defline:  (1 of 7) PTHR13871:SF7 - NUCLEOREDOXIN 1-RELATED Genomic Order:  642
Name:  ? Eucgr.G01004 Secondary Identifier:  ? PAC:32070793
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01004 0.5kb upstream 0.5kb upstream 9888 true Chr07: 15689892-15699779 Eucalyptus grandis
Eucgr.G01004 0.5kb upstream 0.5kb upstream 500 false Chr07: 15689892-15690391 Eucalyptus grandis
Eucgr.G01004 0.5kb downstream 0.5kb downstream 9888 true Chr07: 15690392-15700279 Eucalyptus grandis
Eucgr.G01004 0.5kb downstream 0.5kb downstream 500 false Chr07: 15699780-15700279 Eucalyptus grandis
Eucgr.G01004 1.0kb upstream 1.0kb upstream 10388 true Chr07: 15689392-15699779 Eucalyptus grandis
Eucgr.G01004 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15689392-15690391 Eucalyptus grandis
Eucgr.G01004 1.0kb downstream 1.0kb downstream 10388 true Chr07: 15690392-15700779 Eucalyptus grandis
Eucgr.G01004 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15699780-15700779 Eucalyptus grandis
Eucgr.G01004 2.0kb upstream 2.0kb upstream 11388 true Chr07: 15688392-15699779 Eucalyptus grandis
Eucgr.G01004 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15688392-15690391 Eucalyptus grandis
Eucgr.G01004 2.0kb downstream 2.0kb downstream 11388 true Chr07: 15690392-15701779 Eucalyptus grandis
Eucgr.G01004 2.0kb downstream 2.0kb downstream 2000 false Chr07: 15699780-15701779 Eucalyptus grandis
Eucgr.G01004 5.0kb upstream 5.0kb upstream 14388 true Chr07: 15685392-15699779 Eucalyptus grandis
Eucgr.G01004 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15685392-15690391 Eucalyptus grandis
Eucgr.G01004 5.0kb downstream 5.0kb downstream 14388 true Chr07: 15690392-15704779 Eucalyptus grandis
Eucgr.G01004 5.0kb downstream 5.0kb downstream 5000 false Chr07: 15699780-15704779 Eucalyptus grandis
Eucgr.G01004 10.0kb upstream 10.0kb upstream 19388 true Chr07: 15680392-15699779 Eucalyptus grandis
Eucgr.G01004 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15680392-15690391 Eucalyptus grandis
Eucgr.G01004 10.0kb downstream 10.0kb downstream 19388 true Chr07: 15690392-15709779 Eucalyptus grandis
Eucgr.G01004 10.0kb downstream 10.0kb downstream 10000 false Chr07: 15699780-15709779 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051128 5270 Rosid View MSA
123752154 5271 Pentapetalae View MSA
122790586 5272 Eudicot View MSA
122048350 5273 Angiosperm View MSA
123428873 5275 Viridiplantae View MSA
121310937 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.46012 0.0 9.02846    
cufflinks 1.94557 0.0 5.51672    
cufflinks 3.80418 0.0 9.90971   High
cufflinks 0.837368 0.0 2.79105   Low
cufflinks 1.84871 0.0 5.39415    
cufflinks 2.63978 0.0 7.29423    

0 Strain