Gene : Eucgr.G00777 E. grandis v2.0
Defline:  (1 of 2) PTHR21649//PTHR21649:SF28 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  479
Name:  ? Eucgr.G00777 Secondary Identifier:  ? PAC:32071698
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00777 0.5kb upstream 0.5kb upstream 1855 true Chr07: 11819905-11821759 Eucalyptus grandis
Eucgr.G00777 0.5kb upstream 0.5kb upstream 500 false Chr07: 11821260-11821759 Eucalyptus grandis
Eucgr.G00777 0.5kb downstream 0.5kb downstream 1855 true Chr07: 11819405-11821259 Eucalyptus grandis
Eucgr.G00777 0.5kb downstream 0.5kb downstream 500 false Chr07: 11819405-11819904 Eucalyptus grandis
Eucgr.G00777 1.0kb upstream 1.0kb upstream 2355 true Chr07: 11819905-11822259 Eucalyptus grandis
Eucgr.G00777 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11821260-11822259 Eucalyptus grandis
Eucgr.G00777 1.0kb downstream 1.0kb downstream 2355 true Chr07: 11818905-11821259 Eucalyptus grandis
Eucgr.G00777 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11818905-11819904 Eucalyptus grandis
Eucgr.G00777 2.0kb upstream 2.0kb upstream 3355 true Chr07: 11819905-11823259 Eucalyptus grandis
Eucgr.G00777 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11821260-11823259 Eucalyptus grandis
Eucgr.G00777 2.0kb downstream 2.0kb downstream 3355 true Chr07: 11817905-11821259 Eucalyptus grandis
Eucgr.G00777 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11817905-11819904 Eucalyptus grandis
Eucgr.G00777 5.0kb upstream 5.0kb upstream 6355 true Chr07: 11819905-11826259 Eucalyptus grandis
Eucgr.G00777 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11821260-11826259 Eucalyptus grandis
Eucgr.G00777 5.0kb downstream 5.0kb downstream 6355 true Chr07: 11814905-11821259 Eucalyptus grandis
Eucgr.G00777 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11814905-11819904 Eucalyptus grandis
Eucgr.G00777 10.0kb upstream 10.0kb upstream 11355 true Chr07: 11819905-11831259 Eucalyptus grandis
Eucgr.G00777 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11821260-11831259 Eucalyptus grandis
Eucgr.G00777 10.0kb downstream 10.0kb downstream 11355 true Chr07: 11809905-11821259 Eucalyptus grandis
Eucgr.G00777 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11809905-11819904 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068665 5270 Rosid View MSA
123745282 5271 Pentapetalae View MSA
122788201 5272 Eudicot View MSA
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 78.3842 0.0 175.504 High  
cufflinks 11.5677 0.0 27.1615    
cufflinks 37.0394 0.0 82.0207 High  
cufflinks 1.1078 0.0 3.30713   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 163.188 0.0 385.693 High High

0 Strain