Gene : Eucgr.G00769 E. grandis v2.0
Defline:  (1 of 1) PTHR24093:SF124 - COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC Genomic Order:  472
Name:  ? Eucgr.G00769 Secondary Identifier:  ? PAC:32072964
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00769 0.5kb upstream 0.5kb upstream 19349 true Chr07: 11731838-11751186 Eucalyptus grandis
Eucgr.G00769 0.5kb upstream 0.5kb upstream 500 false Chr07: 11731838-11732337 Eucalyptus grandis
Eucgr.G00769 0.5kb downstream 0.5kb downstream 19349 true Chr07: 11732338-11751686 Eucalyptus grandis
Eucgr.G00769 0.5kb downstream 0.5kb downstream 500 false Chr07: 11751187-11751686 Eucalyptus grandis
Eucgr.G00769 1.0kb upstream 1.0kb upstream 19849 true Chr07: 11731338-11751186 Eucalyptus grandis
Eucgr.G00769 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11731338-11732337 Eucalyptus grandis
Eucgr.G00769 1.0kb downstream 1.0kb downstream 19849 true Chr07: 11732338-11752186 Eucalyptus grandis
Eucgr.G00769 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11751187-11752186 Eucalyptus grandis
Eucgr.G00769 2.0kb upstream 2.0kb upstream 20849 true Chr07: 11730338-11751186 Eucalyptus grandis
Eucgr.G00769 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11730338-11732337 Eucalyptus grandis
Eucgr.G00769 2.0kb downstream 2.0kb downstream 20849 true Chr07: 11732338-11753186 Eucalyptus grandis
Eucgr.G00769 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11751187-11753186 Eucalyptus grandis
Eucgr.G00769 5.0kb upstream 5.0kb upstream 23849 true Chr07: 11727338-11751186 Eucalyptus grandis
Eucgr.G00769 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11727338-11732337 Eucalyptus grandis
Eucgr.G00769 5.0kb downstream 5.0kb downstream 23849 true Chr07: 11732338-11756186 Eucalyptus grandis
Eucgr.G00769 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11751187-11756186 Eucalyptus grandis
Eucgr.G00769 10.0kb upstream 10.0kb upstream 28849 true Chr07: 11722338-11751186 Eucalyptus grandis
Eucgr.G00769 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11722338-11732337 Eucalyptus grandis
Eucgr.G00769 10.0kb downstream 10.0kb downstream 28849 true Chr07: 11732338-11761186 Eucalyptus grandis
Eucgr.G00769 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11751187-11761186 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074915 5270 Rosid View MSA
123753356 5271 Pentapetalae View MSA
122796910 5272 Eudicot View MSA
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.81097 0.0 17.8405    
cufflinks 2.9673 0.0 7.0771    
cufflinks 7.97663 0.0 20.1807    
cufflinks 1.33896 0.0 4.44717   Low
cufflinks 3.37802 0.0 7.98846    
cufflinks 5.99692 0.0 14.2717    

0 Strain