Gene : Eucgr.G00648 E. grandis v2.0
Defline:  (1 of 1) PTHR10762:SF1 - DIPHTHAMIDE BIOSYNTHESIS PROTEIN 1 Genomic Order:  376
Name:  ? Eucgr.G00648 Secondary Identifier:  ? PAC:32073292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00648 0.5kb upstream 0.5kb upstream 3733 true Chr07: 9579558-9583290 Eucalyptus grandis
Eucgr.G00648 0.5kb upstream 0.5kb upstream 500 false Chr07: 9579558-9580057 Eucalyptus grandis
Eucgr.G00648 0.5kb downstream 0.5kb downstream 3733 true Chr07: 9580058-9583790 Eucalyptus grandis
Eucgr.G00648 0.5kb downstream 0.5kb downstream 500 false Chr07: 9583291-9583790 Eucalyptus grandis
Eucgr.G00648 1.0kb upstream 1.0kb upstream 4233 true Chr07: 9579058-9583290 Eucalyptus grandis
Eucgr.G00648 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9579058-9580057 Eucalyptus grandis
Eucgr.G00648 1.0kb downstream 1.0kb downstream 4233 true Chr07: 9580058-9584290 Eucalyptus grandis
Eucgr.G00648 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9583291-9584290 Eucalyptus grandis
Eucgr.G00648 2.0kb upstream 2.0kb upstream 5233 true Chr07: 9578058-9583290 Eucalyptus grandis
Eucgr.G00648 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9578058-9580057 Eucalyptus grandis
Eucgr.G00648 2.0kb downstream 2.0kb downstream 5233 true Chr07: 9580058-9585290 Eucalyptus grandis
Eucgr.G00648 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9583291-9585290 Eucalyptus grandis
Eucgr.G00648 5.0kb upstream 5.0kb upstream 8233 true Chr07: 9575058-9583290 Eucalyptus grandis
Eucgr.G00648 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9575058-9580057 Eucalyptus grandis
Eucgr.G00648 5.0kb downstream 5.0kb downstream 8233 true Chr07: 9580058-9588290 Eucalyptus grandis
Eucgr.G00648 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9583291-9588290 Eucalyptus grandis
Eucgr.G00648 10.0kb upstream 10.0kb upstream 13233 true Chr07: 9570058-9583290 Eucalyptus grandis
Eucgr.G00648 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9570058-9580057 Eucalyptus grandis
Eucgr.G00648 10.0kb downstream 10.0kb downstream 13233 true Chr07: 9580058-9593290 Eucalyptus grandis
Eucgr.G00648 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9583291-9593290 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063918 5270 Rosid View MSA
123738037 5271 Pentapetalae View MSA
122790582 5272 Eudicot View MSA
122041758 5273 Angiosperm View MSA
121347504 5274 Embryophyte View MSA
123426492 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0262 0.0 36.2107    
cufflinks 7.51667 0.0 18.1253   Low
cufflinks 12.7264 0.0 29.3275    
cufflinks 23.2298 0.0 51.8025   High
cufflinks 12.7891 0.0 29.4564    
cufflinks 9.80274 0.0 22.8171    

0 Strain