Gene : Eucgr.G00649 E. grandis v2.0
Defline:  (1 of 6) PTHR30620:SF40 - BETA-D-XYLOSIDASE 3-RELATED Genomic Order:  377
Name:  ? Eucgr.G00649 Secondary Identifier:  ? PAC:32070239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00649 0.5kb upstream 0.5kb upstream 5680 true Chr07: 9594684-9600363 Eucalyptus grandis
Eucgr.G00649 0.5kb upstream 0.5kb upstream 500 false Chr07: 9594684-9595183 Eucalyptus grandis
Eucgr.G00649 0.5kb downstream 0.5kb downstream 5680 true Chr07: 9595184-9600863 Eucalyptus grandis
Eucgr.G00649 0.5kb downstream 0.5kb downstream 500 false Chr07: 9600364-9600863 Eucalyptus grandis
Eucgr.G00649 1.0kb upstream 1.0kb upstream 6180 true Chr07: 9594184-9600363 Eucalyptus grandis
Eucgr.G00649 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9594184-9595183 Eucalyptus grandis
Eucgr.G00649 1.0kb downstream 1.0kb downstream 6180 true Chr07: 9595184-9601363 Eucalyptus grandis
Eucgr.G00649 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9600364-9601363 Eucalyptus grandis
Eucgr.G00649 2.0kb upstream 2.0kb upstream 7180 true Chr07: 9593184-9600363 Eucalyptus grandis
Eucgr.G00649 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9593184-9595183 Eucalyptus grandis
Eucgr.G00649 2.0kb downstream 2.0kb downstream 7180 true Chr07: 9595184-9602363 Eucalyptus grandis
Eucgr.G00649 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9600364-9602363 Eucalyptus grandis
Eucgr.G00649 5.0kb upstream 5.0kb upstream 10180 true Chr07: 9590184-9600363 Eucalyptus grandis
Eucgr.G00649 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9590184-9595183 Eucalyptus grandis
Eucgr.G00649 5.0kb downstream 5.0kb downstream 10180 true Chr07: 9595184-9605363 Eucalyptus grandis
Eucgr.G00649 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9600364-9605363 Eucalyptus grandis
Eucgr.G00649 10.0kb upstream 10.0kb upstream 15180 true Chr07: 9585184-9600363 Eucalyptus grandis
Eucgr.G00649 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9585184-9595183 Eucalyptus grandis
Eucgr.G00649 10.0kb downstream 10.0kb downstream 15180 true Chr07: 9595184-9610363 Eucalyptus grandis
Eucgr.G00649 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9600364-9610363 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062868 5270 Rosid View MSA
123737560 5271 Pentapetalae View MSA
122787733 5272 Eudicot View MSA
122044178 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.37548 0.0 18.7724    
cufflinks 21.4655 0.0 47.5575    
cufflinks 2.63088 0.0 6.48934   Low
cufflinks 30.1705 0.0 67.3991   High
cufflinks 7.78169 0.0 17.526    
cufflinks 10.992 0.0 24.3942    

0 Strain