Gene : Eucgr.G00650 E. grandis v2.0
Defline:  (1 of 6) PTHR30620:SF40 - BETA-D-XYLOSIDASE 3-RELATED Genomic Order:  378
Name:  ? Eucgr.G00650 Secondary Identifier:  ? PAC:32073463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00650 0.5kb upstream 0.5kb upstream 5362 true Chr07: 9617832-9623193 Eucalyptus grandis
Eucgr.G00650 0.5kb upstream 0.5kb upstream 500 false Chr07: 9617832-9618331 Eucalyptus grandis
Eucgr.G00650 0.5kb downstream 0.5kb downstream 5362 true Chr07: 9618332-9623693 Eucalyptus grandis
Eucgr.G00650 0.5kb downstream 0.5kb downstream 500 false Chr07: 9623194-9623693 Eucalyptus grandis
Eucgr.G00650 1.0kb upstream 1.0kb upstream 5862 true Chr07: 9617332-9623193 Eucalyptus grandis
Eucgr.G00650 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9617332-9618331 Eucalyptus grandis
Eucgr.G00650 1.0kb downstream 1.0kb downstream 5862 true Chr07: 9618332-9624193 Eucalyptus grandis
Eucgr.G00650 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9623194-9624193 Eucalyptus grandis
Eucgr.G00650 2.0kb upstream 2.0kb upstream 6862 true Chr07: 9616332-9623193 Eucalyptus grandis
Eucgr.G00650 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9616332-9618331 Eucalyptus grandis
Eucgr.G00650 2.0kb downstream 2.0kb downstream 6862 true Chr07: 9618332-9625193 Eucalyptus grandis
Eucgr.G00650 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9623194-9625193 Eucalyptus grandis
Eucgr.G00650 5.0kb upstream 5.0kb upstream 9862 true Chr07: 9613332-9623193 Eucalyptus grandis
Eucgr.G00650 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9613332-9618331 Eucalyptus grandis
Eucgr.G00650 5.0kb downstream 5.0kb downstream 9862 true Chr07: 9618332-9628193 Eucalyptus grandis
Eucgr.G00650 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9623194-9628193 Eucalyptus grandis
Eucgr.G00650 10.0kb upstream 10.0kb upstream 14862 true Chr07: 9608332-9623193 Eucalyptus grandis
Eucgr.G00650 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9608332-9618331 Eucalyptus grandis
Eucgr.G00650 10.0kb downstream 10.0kb downstream 14862 true Chr07: 9618332-9633193 Eucalyptus grandis
Eucgr.G00650 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9623194-9633193 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062868 5270 Rosid View MSA
123737560 5271 Pentapetalae View MSA
122787733 5272 Eudicot View MSA
122044178 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21925 0.0 3.25344    
cufflinks 1.48949 0.0 3.91329    
cufflinks 0.589206 0.0 1.69944    
cufflinks 1.90728 0.0 4.88917    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00566527 0.0 0.0551985 Low Low

0 Strain