Gene : Eucgr.G00660 E. grandis v2.0
Defline:  (1 of 1) PTHR13370 - RNA METHYLASE-RELATED Genomic Order:  387
Name:  ? Eucgr.G00660 Secondary Identifier:  ? PAC:32072783
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6829 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00660 0.5kb upstream 0.5kb upstream 5693 true Chr07: 9758420-9764112 Eucalyptus grandis
Eucgr.G00660 0.5kb upstream 0.5kb upstream 500 false Chr07: 9763613-9764112 Eucalyptus grandis
Eucgr.G00660 0.5kb downstream 0.5kb downstream 5693 true Chr07: 9757920-9763612 Eucalyptus grandis
Eucgr.G00660 0.5kb downstream 0.5kb downstream 500 false Chr07: 9757920-9758419 Eucalyptus grandis
Eucgr.G00660 1.0kb upstream 1.0kb upstream 6193 true Chr07: 9758420-9764612 Eucalyptus grandis
Eucgr.G00660 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9763613-9764612 Eucalyptus grandis
Eucgr.G00660 1.0kb downstream 1.0kb downstream 6193 true Chr07: 9757420-9763612 Eucalyptus grandis
Eucgr.G00660 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9757420-9758419 Eucalyptus grandis
Eucgr.G00660 2.0kb upstream 2.0kb upstream 7193 true Chr07: 9758420-9765612 Eucalyptus grandis
Eucgr.G00660 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9763613-9765612 Eucalyptus grandis
Eucgr.G00660 2.0kb downstream 2.0kb downstream 7193 true Chr07: 9756420-9763612 Eucalyptus grandis
Eucgr.G00660 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9756420-9758419 Eucalyptus grandis
Eucgr.G00660 5.0kb upstream 5.0kb upstream 10193 true Chr07: 9758420-9768612 Eucalyptus grandis
Eucgr.G00660 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9763613-9768612 Eucalyptus grandis
Eucgr.G00660 5.0kb downstream 5.0kb downstream 10193 true Chr07: 9753420-9763612 Eucalyptus grandis
Eucgr.G00660 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9753420-9758419 Eucalyptus grandis
Eucgr.G00660 10.0kb upstream 10.0kb upstream 15193 true Chr07: 9758420-9773612 Eucalyptus grandis
Eucgr.G00660 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9763613-9773612 Eucalyptus grandis
Eucgr.G00660 10.0kb downstream 10.0kb downstream 15193 true Chr07: 9748420-9763612 Eucalyptus grandis
Eucgr.G00660 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9748420-9758419 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065317 5270 Rosid View MSA
123738561 5271 Pentapetalae View MSA
122788498 5272 Eudicot View MSA
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.17005 0.0 10.4261    
cufflinks 0.381631 0.0 1.22865 Low Low
cufflinks 4.28369 0.0 10.6646    
cufflinks 2.44955 0.0 6.42489    
cufflinks 1.589 0.0 4.35744    
cufflinks 4.9231 0.0 12.128    

0 Strain