Gene : Eucgr.G00629 E. grandis v2.0
Defline:  (1 of 2) PTHR10643 - KINETOCHORE PROTEIN NDC80 Genomic Order:  364
Name:  ? Eucgr.G00629 Secondary Identifier:  ? PAC:32073188
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00629 0.5kb upstream 0.5kb upstream 2336 true Chr07: 9252571-9254906 Eucalyptus grandis
Eucgr.G00629 0.5kb upstream 0.5kb upstream 500 false Chr07: 9254407-9254906 Eucalyptus grandis
Eucgr.G00629 0.5kb downstream 0.5kb downstream 2336 true Chr07: 9252071-9254406 Eucalyptus grandis
Eucgr.G00629 0.5kb downstream 0.5kb downstream 500 false Chr07: 9252071-9252570 Eucalyptus grandis
Eucgr.G00629 1.0kb upstream 1.0kb upstream 2836 true Chr07: 9252571-9255406 Eucalyptus grandis
Eucgr.G00629 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9254407-9255406 Eucalyptus grandis
Eucgr.G00629 1.0kb downstream 1.0kb downstream 2836 true Chr07: 9251571-9254406 Eucalyptus grandis
Eucgr.G00629 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9251571-9252570 Eucalyptus grandis
Eucgr.G00629 2.0kb upstream 2.0kb upstream 3836 true Chr07: 9252571-9256406 Eucalyptus grandis
Eucgr.G00629 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9254407-9256406 Eucalyptus grandis
Eucgr.G00629 2.0kb downstream 2.0kb downstream 3836 true Chr07: 9250571-9254406 Eucalyptus grandis
Eucgr.G00629 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9250571-9252570 Eucalyptus grandis
Eucgr.G00629 5.0kb upstream 5.0kb upstream 6836 true Chr07: 9252571-9259406 Eucalyptus grandis
Eucgr.G00629 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9254407-9259406 Eucalyptus grandis
Eucgr.G00629 5.0kb downstream 5.0kb downstream 6836 true Chr07: 9247571-9254406 Eucalyptus grandis
Eucgr.G00629 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9247571-9252570 Eucalyptus grandis
Eucgr.G00629 10.0kb upstream 10.0kb upstream 11836 true Chr07: 9252571-9264406 Eucalyptus grandis
Eucgr.G00629 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9254407-9264406 Eucalyptus grandis
Eucgr.G00629 10.0kb downstream 10.0kb downstream 11836 true Chr07: 9242571-9254406 Eucalyptus grandis
Eucgr.G00629 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9242571-9252570 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064333 5270 Rosid View MSA
123737322 5271 Pentapetalae View MSA
122786074 5272 Eudicot View MSA
122049067 5273 Angiosperm View MSA
121344778 5274 Embryophyte View MSA
123428580 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.62712 0.0 11.4453    
cufflinks 2.59289 0.0 6.85175   Low
cufflinks 5.26377 0.0 12.8954   High
cufflinks 3.56906 0.0 9.0986    
cufflinks 4.36077 0.0 10.9235    
cufflinks 2.68165 0.0 6.99042   Low

0 Strain