Gene : Eucgr.G01741 E. grandis v2.0
Defline:  (1 of 1) 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase Genomic Order:  1343
Name:  ? Eucgr.G01741 Secondary Identifier:  ? PAC:32071371
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6121 Eucalyptus grandis pathologic  
Egrandis PWY-841 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01741 0.5kb upstream 0.5kb upstream 2153 true Chr07: 33511263-33513415 Eucalyptus grandis
Eucgr.G01741 0.5kb upstream 0.5kb upstream 500 false Chr07: 33512916-33513415 Eucalyptus grandis
Eucgr.G01741 0.5kb downstream 0.5kb downstream 2153 true Chr07: 33510763-33512915 Eucalyptus grandis
Eucgr.G01741 0.5kb downstream 0.5kb downstream 500 false Chr07: 33510763-33511262 Eucalyptus grandis
Eucgr.G01741 1.0kb upstream 1.0kb upstream 2653 true Chr07: 33511263-33513915 Eucalyptus grandis
Eucgr.G01741 1.0kb upstream 1.0kb upstream 1000 false Chr07: 33512916-33513915 Eucalyptus grandis
Eucgr.G01741 1.0kb downstream 1.0kb downstream 2653 true Chr07: 33510263-33512915 Eucalyptus grandis
Eucgr.G01741 1.0kb downstream 1.0kb downstream 1000 false Chr07: 33510263-33511262 Eucalyptus grandis
Eucgr.G01741 2.0kb upstream 2.0kb upstream 3653 true Chr07: 33511263-33514915 Eucalyptus grandis
Eucgr.G01741 2.0kb upstream 2.0kb upstream 2000 false Chr07: 33512916-33514915 Eucalyptus grandis
Eucgr.G01741 2.0kb downstream 2.0kb downstream 3653 true Chr07: 33509263-33512915 Eucalyptus grandis
Eucgr.G01741 2.0kb downstream 2.0kb downstream 2000 false Chr07: 33509263-33511262 Eucalyptus grandis
Eucgr.G01741 5.0kb upstream 5.0kb upstream 6653 true Chr07: 33511263-33517915 Eucalyptus grandis
Eucgr.G01741 5.0kb upstream 5.0kb upstream 5000 false Chr07: 33512916-33517915 Eucalyptus grandis
Eucgr.G01741 5.0kb downstream 5.0kb downstream 6653 true Chr07: 33506263-33512915 Eucalyptus grandis
Eucgr.G01741 5.0kb downstream 5.0kb downstream 5000 false Chr07: 33506263-33511262 Eucalyptus grandis
Eucgr.G01741 10.0kb upstream 10.0kb upstream 11653 true Chr07: 33511263-33522915 Eucalyptus grandis
Eucgr.G01741 10.0kb upstream 10.0kb upstream 10000 false Chr07: 33512916-33522915 Eucalyptus grandis
Eucgr.G01741 10.0kb downstream 10.0kb downstream 11653 true Chr07: 33501263-33512915 Eucalyptus grandis
Eucgr.G01741 10.0kb downstream 10.0kb downstream 10000 false Chr07: 33501263-33511262 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066894 5270 Rosid View MSA
123745700 5271 Pentapetalae View MSA
122790878 5272 Eudicot View MSA
122046645 5273 Angiosperm View MSA
121350725 5274 Embryophyte View MSA
123425714 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.224 0.0 27.8829    
cufflinks 0.439095 0.0 1.41365 Low Low
cufflinks 12.8257 0.0 29.2706    
cufflinks 4.26754 0.0 10.7682    
cufflinks 2.39956 0.0 6.39609    
cufflinks 4.38699 0.0 10.9034    

0 Strain