Gene : Eucgr.G01717 E. grandis v2.0
Defline:  (1 of 3) PTHR19876//PTHR19876:SF7 - COATOMER Genomic Order:  1322
Name:  ? Eucgr.G01717 Secondary Identifier:  ? PAC:32072407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01717 0.5kb upstream 0.5kb upstream 7137 true Chr07: 32876679-32883815 Eucalyptus grandis
Eucgr.G01717 0.5kb upstream 0.5kb upstream 500 false Chr07: 32883316-32883815 Eucalyptus grandis
Eucgr.G01717 0.5kb downstream 0.5kb downstream 7137 true Chr07: 32876179-32883315 Eucalyptus grandis
Eucgr.G01717 0.5kb downstream 0.5kb downstream 500 false Chr07: 32876179-32876678 Eucalyptus grandis
Eucgr.G01717 1.0kb upstream 1.0kb upstream 7637 true Chr07: 32876679-32884315 Eucalyptus grandis
Eucgr.G01717 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32883316-32884315 Eucalyptus grandis
Eucgr.G01717 1.0kb downstream 1.0kb downstream 7637 true Chr07: 32875679-32883315 Eucalyptus grandis
Eucgr.G01717 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32875679-32876678 Eucalyptus grandis
Eucgr.G01717 2.0kb upstream 2.0kb upstream 8637 true Chr07: 32876679-32885315 Eucalyptus grandis
Eucgr.G01717 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32883316-32885315 Eucalyptus grandis
Eucgr.G01717 2.0kb downstream 2.0kb downstream 8637 true Chr07: 32874679-32883315 Eucalyptus grandis
Eucgr.G01717 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32874679-32876678 Eucalyptus grandis
Eucgr.G01717 5.0kb upstream 5.0kb upstream 11637 true Chr07: 32876679-32888315 Eucalyptus grandis
Eucgr.G01717 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32883316-32888315 Eucalyptus grandis
Eucgr.G01717 5.0kb downstream 5.0kb downstream 11637 true Chr07: 32871679-32883315 Eucalyptus grandis
Eucgr.G01717 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32871679-32876678 Eucalyptus grandis
Eucgr.G01717 10.0kb upstream 10.0kb upstream 16637 true Chr07: 32876679-32893315 Eucalyptus grandis
Eucgr.G01717 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32883316-32893315 Eucalyptus grandis
Eucgr.G01717 10.0kb downstream 10.0kb downstream 16637 true Chr07: 32866679-32883315 Eucalyptus grandis
Eucgr.G01717 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32866679-32876678 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691195 5273 Angiosperm View MSA
124052344 5270 Rosid View MSA
123646971 5271 Pentapetalae View MSA
122680994 5272 Eudicot View MSA
120963059 5274 Embryophyte View MSA
123003419 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.13082 0.0 18.2427    
cufflinks 12.0516 0.0 27.3509    
cufflinks 7.36538 0.0 17.3326    
cufflinks 14.314 0.0 32.8029   High
cufflinks 5.94526 0.0 13.6724   Low
cufflinks 6.83245 0.0 15.6026    

0 Strain