Gene : Eucgr.G01639 E. grandis v2.0
Defline:  (1 of 98) PF02362 - B3 DNA binding domain (B3) Genomic Order:  1296
Name:  ? Eucgr.G01639 Secondary Identifier:  ? PAC:32071216
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01639 0.5kb upstream 0.5kb upstream 2399 true Chr07: 32154339-32156737 Eucalyptus grandis
Eucgr.G01639 0.5kb upstream 0.5kb upstream 500 false Chr07: 32154339-32154838 Eucalyptus grandis
Eucgr.G01639 0.5kb downstream 0.5kb downstream 2399 true Chr07: 32154839-32157237 Eucalyptus grandis
Eucgr.G01639 0.5kb downstream 0.5kb downstream 500 false Chr07: 32156738-32157237 Eucalyptus grandis
Eucgr.G01639 1.0kb upstream 1.0kb upstream 2899 true Chr07: 32153839-32156737 Eucalyptus grandis
Eucgr.G01639 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32153839-32154838 Eucalyptus grandis
Eucgr.G01639 1.0kb downstream 1.0kb downstream 2899 true Chr07: 32154839-32157737 Eucalyptus grandis
Eucgr.G01639 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32156738-32157737 Eucalyptus grandis
Eucgr.G01639 2.0kb upstream 2.0kb upstream 3899 true Chr07: 32152839-32156737 Eucalyptus grandis
Eucgr.G01639 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32152839-32154838 Eucalyptus grandis
Eucgr.G01639 2.0kb downstream 2.0kb downstream 3899 true Chr07: 32154839-32158737 Eucalyptus grandis
Eucgr.G01639 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32156738-32158737 Eucalyptus grandis
Eucgr.G01639 5.0kb upstream 5.0kb upstream 6899 true Chr07: 32149839-32156737 Eucalyptus grandis
Eucgr.G01639 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32149839-32154838 Eucalyptus grandis
Eucgr.G01639 5.0kb downstream 5.0kb downstream 6899 true Chr07: 32154839-32161737 Eucalyptus grandis
Eucgr.G01639 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32156738-32161737 Eucalyptus grandis
Eucgr.G01639 10.0kb upstream 10.0kb upstream 11899 true Chr07: 32144839-32156737 Eucalyptus grandis
Eucgr.G01639 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32144839-32154838 Eucalyptus grandis
Eucgr.G01639 10.0kb downstream 10.0kb downstream 11899 true Chr07: 32154839-32166737 Eucalyptus grandis
Eucgr.G01639 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32156738-32166737 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074225 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.45014 0.0 1.68319 Low Low
cufflinks 2.44248 0.0 7.22793    
cufflinks 0.433886 0.0 1.62644   Low
cufflinks 2.02331 0.0 6.16989    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.96234 0.0 8.75841    

0 Strain