Gene : Eucgr.G01602 E. grandis v2.0
Defline:  (1 of 7) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  1130
Name:  ? Eucgr.G01602 Secondary Identifier:  ? PAC:32072771
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01602 0.5kb upstream 0.5kb upstream 1229 true Chr07: 27223840-27225068 Eucalyptus grandis
Eucgr.G01602 0.5kb upstream 0.5kb upstream 500 false Chr07: 27224569-27225068 Eucalyptus grandis
Eucgr.G01602 0.5kb downstream 0.5kb downstream 1229 true Chr07: 27223340-27224568 Eucalyptus grandis
Eucgr.G01602 0.5kb downstream 0.5kb downstream 500 false Chr07: 27223340-27223839 Eucalyptus grandis
Eucgr.G01602 1.0kb upstream 1.0kb upstream 1729 true Chr07: 27223840-27225568 Eucalyptus grandis
Eucgr.G01602 1.0kb upstream 1.0kb upstream 1000 false Chr07: 27224569-27225568 Eucalyptus grandis
Eucgr.G01602 1.0kb downstream 1.0kb downstream 1729 true Chr07: 27222840-27224568 Eucalyptus grandis
Eucgr.G01602 1.0kb downstream 1.0kb downstream 1000 false Chr07: 27222840-27223839 Eucalyptus grandis
Eucgr.G01602 2.0kb upstream 2.0kb upstream 2729 true Chr07: 27223840-27226568 Eucalyptus grandis
Eucgr.G01602 2.0kb upstream 2.0kb upstream 2000 false Chr07: 27224569-27226568 Eucalyptus grandis
Eucgr.G01602 2.0kb downstream 2.0kb downstream 2729 true Chr07: 27221840-27224568 Eucalyptus grandis
Eucgr.G01602 2.0kb downstream 2.0kb downstream 2000 false Chr07: 27221840-27223839 Eucalyptus grandis
Eucgr.G01602 5.0kb upstream 5.0kb upstream 5729 true Chr07: 27223840-27229568 Eucalyptus grandis
Eucgr.G01602 5.0kb upstream 5.0kb upstream 5000 false Chr07: 27224569-27229568 Eucalyptus grandis
Eucgr.G01602 5.0kb downstream 5.0kb downstream 5729 true Chr07: 27218840-27224568 Eucalyptus grandis
Eucgr.G01602 5.0kb downstream 5.0kb downstream 5000 false Chr07: 27218840-27223839 Eucalyptus grandis
Eucgr.G01602 10.0kb upstream 10.0kb upstream 10729 true Chr07: 27223840-27234568 Eucalyptus grandis
Eucgr.G01602 10.0kb upstream 10.0kb upstream 10000 false Chr07: 27224569-27234568 Eucalyptus grandis
Eucgr.G01602 10.0kb downstream 10.0kb downstream 10729 true Chr07: 27213840-27224568 Eucalyptus grandis
Eucgr.G01602 10.0kb downstream 10.0kb downstream 10000 false Chr07: 27213840-27223839 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.44713 0.0 4.3806    
cufflinks 1.728 0.0 5.11742    
cufflinks 0.345993 0.0 1.26172 Low Low
cufflinks 0.756376 0.0 2.47587    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain