Gene : Eucgr.G01465 E. grandis v2.0
Defline:  (1 of 1) PTHR11851:SF68 - PRESEQUENCE PROTEASE 1, CHLOROPLASTIC/MITOCHONDRIAL-RELATED Genomic Order:  994
Name:  ? Eucgr.G01465 Secondary Identifier:  ? PAC:32070207
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01465 0.5kb upstream 0.5kb upstream 11330 true Chr07: 23463416-23474745 Eucalyptus grandis
Eucgr.G01465 0.5kb upstream 0.5kb upstream 500 false Chr07: 23474246-23474745 Eucalyptus grandis
Eucgr.G01465 0.5kb downstream 0.5kb downstream 11330 true Chr07: 23462916-23474245 Eucalyptus grandis
Eucgr.G01465 0.5kb downstream 0.5kb downstream 500 false Chr07: 23462916-23463415 Eucalyptus grandis
Eucgr.G01465 1.0kb upstream 1.0kb upstream 11830 true Chr07: 23463416-23475245 Eucalyptus grandis
Eucgr.G01465 1.0kb upstream 1.0kb upstream 1000 false Chr07: 23474246-23475245 Eucalyptus grandis
Eucgr.G01465 1.0kb downstream 1.0kb downstream 11830 true Chr07: 23462416-23474245 Eucalyptus grandis
Eucgr.G01465 1.0kb downstream 1.0kb downstream 1000 false Chr07: 23462416-23463415 Eucalyptus grandis
Eucgr.G01465 2.0kb upstream 2.0kb upstream 12830 true Chr07: 23463416-23476245 Eucalyptus grandis
Eucgr.G01465 2.0kb upstream 2.0kb upstream 2000 false Chr07: 23474246-23476245 Eucalyptus grandis
Eucgr.G01465 2.0kb downstream 2.0kb downstream 12830 true Chr07: 23461416-23474245 Eucalyptus grandis
Eucgr.G01465 2.0kb downstream 2.0kb downstream 2000 false Chr07: 23461416-23463415 Eucalyptus grandis
Eucgr.G01465 5.0kb upstream 5.0kb upstream 15830 true Chr07: 23463416-23479245 Eucalyptus grandis
Eucgr.G01465 5.0kb upstream 5.0kb upstream 5000 false Chr07: 23474246-23479245 Eucalyptus grandis
Eucgr.G01465 5.0kb downstream 5.0kb downstream 15830 true Chr07: 23458416-23474245 Eucalyptus grandis
Eucgr.G01465 5.0kb downstream 5.0kb downstream 5000 false Chr07: 23458416-23463415 Eucalyptus grandis
Eucgr.G01465 10.0kb upstream 10.0kb upstream 20830 true Chr07: 23463416-23484245 Eucalyptus grandis
Eucgr.G01465 10.0kb upstream 10.0kb upstream 10000 false Chr07: 23474246-23484245 Eucalyptus grandis
Eucgr.G01465 10.0kb downstream 10.0kb downstream 20830 true Chr07: 23453416-23474245 Eucalyptus grandis
Eucgr.G01465 10.0kb downstream 10.0kb downstream 10000 false Chr07: 23453416-23463415 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061044 5270 Rosid View MSA
123737107 5271 Pentapetalae View MSA
122792792 5272 Eudicot View MSA
122042751 5273 Angiosperm View MSA
121343874 5274 Embryophyte View MSA
123424762 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.0574 0.0 67.5192 High  
cufflinks 7.97485 0.0 17.7964    
cufflinks 20.7401 0.0 46.074    
cufflinks 6.50853 0.0 14.6407    
cufflinks 7.17 0.0 16.101    
cufflinks 86.857 0.0 210.592 High High

0 Strain