Gene : Eucgr.G01434 E. grandis v2.0
Defline:  (1 of 1) PTHR22855:SF13 - METHYLCROTONOYL-COA CARBOXYLASE BETA CHAIN, MITOCHONDRIAL Genomic Order:  967
Name:  ? Eucgr.G01434 Secondary Identifier:  ? PAC:32072205
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LEU-DEG2-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01434 0.5kb upstream 0.5kb upstream 6069 true Chr07: 23031785-23037853 Eucalyptus grandis
Eucgr.G01434 0.5kb upstream 0.5kb upstream 500 false Chr07: 23037354-23037853 Eucalyptus grandis
Eucgr.G01434 0.5kb downstream 0.5kb downstream 6069 true Chr07: 23031285-23037353 Eucalyptus grandis
Eucgr.G01434 0.5kb downstream 0.5kb downstream 500 false Chr07: 23031285-23031784 Eucalyptus grandis
Eucgr.G01434 1.0kb upstream 1.0kb upstream 6569 true Chr07: 23031785-23038353 Eucalyptus grandis
Eucgr.G01434 1.0kb upstream 1.0kb upstream 1000 false Chr07: 23037354-23038353 Eucalyptus grandis
Eucgr.G01434 1.0kb downstream 1.0kb downstream 6569 true Chr07: 23030785-23037353 Eucalyptus grandis
Eucgr.G01434 1.0kb downstream 1.0kb downstream 1000 false Chr07: 23030785-23031784 Eucalyptus grandis
Eucgr.G01434 2.0kb upstream 2.0kb upstream 7569 true Chr07: 23031785-23039353 Eucalyptus grandis
Eucgr.G01434 2.0kb upstream 2.0kb upstream 2000 false Chr07: 23037354-23039353 Eucalyptus grandis
Eucgr.G01434 2.0kb downstream 2.0kb downstream 7569 true Chr07: 23029785-23037353 Eucalyptus grandis
Eucgr.G01434 2.0kb downstream 2.0kb downstream 2000 false Chr07: 23029785-23031784 Eucalyptus grandis
Eucgr.G01434 5.0kb upstream 5.0kb upstream 10569 true Chr07: 23031785-23042353 Eucalyptus grandis
Eucgr.G01434 5.0kb upstream 5.0kb upstream 5000 false Chr07: 23037354-23042353 Eucalyptus grandis
Eucgr.G01434 5.0kb downstream 5.0kb downstream 10569 true Chr07: 23026785-23037353 Eucalyptus grandis
Eucgr.G01434 5.0kb downstream 5.0kb downstream 5000 false Chr07: 23026785-23031784 Eucalyptus grandis
Eucgr.G01434 10.0kb upstream 10.0kb upstream 15569 true Chr07: 23031785-23047353 Eucalyptus grandis
Eucgr.G01434 10.0kb upstream 10.0kb upstream 10000 false Chr07: 23037354-23047353 Eucalyptus grandis
Eucgr.G01434 10.0kb downstream 10.0kb downstream 15569 true Chr07: 23021785-23037353 Eucalyptus grandis
Eucgr.G01434 10.0kb downstream 10.0kb downstream 10000 false Chr07: 23021785-23031784 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061199 5270 Rosid View MSA
123740620 5271 Pentapetalae View MSA
122793626 5272 Eudicot View MSA
122044864 5273 Angiosperm View MSA
121344064 5274 Embryophyte View MSA
123424408 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.11284 0.0 16.379    
cufflinks 5.79778 0.0 13.5608    
cufflinks 6.61729 0.0 15.295    
cufflinks 4.65734 0.0 11.0496    
cufflinks 2.94243 0.0 7.44017   Low
cufflinks 15.9334 0.0 35.8536   High

0 Strain