Gene : Eucgr.G01372 E. grandis v2.0
Defline:  (1 of 2) PF00584 - SecE/Sec61-gamma subunits of protein translocation complex (SecE) Genomic Order:  926
Name:  ? Eucgr.G01372 Secondary Identifier:  ? PAC:32072084
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01372 0.5kb upstream 0.5kb upstream 3041 true Chr07: 21423060-21426100 Eucalyptus grandis
Eucgr.G01372 0.5kb upstream 0.5kb upstream 500 false Chr07: 21425601-21426100 Eucalyptus grandis
Eucgr.G01372 0.5kb downstream 0.5kb downstream 3041 true Chr07: 21422560-21425600 Eucalyptus grandis
Eucgr.G01372 0.5kb downstream 0.5kb downstream 500 false Chr07: 21422560-21423059 Eucalyptus grandis
Eucgr.G01372 1.0kb upstream 1.0kb upstream 3541 true Chr07: 21423060-21426600 Eucalyptus grandis
Eucgr.G01372 1.0kb upstream 1.0kb upstream 1000 false Chr07: 21425601-21426600 Eucalyptus grandis
Eucgr.G01372 1.0kb downstream 1.0kb downstream 3541 true Chr07: 21422060-21425600 Eucalyptus grandis
Eucgr.G01372 1.0kb downstream 1.0kb downstream 1000 false Chr07: 21422060-21423059 Eucalyptus grandis
Eucgr.G01372 2.0kb upstream 2.0kb upstream 4541 true Chr07: 21423060-21427600 Eucalyptus grandis
Eucgr.G01372 2.0kb upstream 2.0kb upstream 2000 false Chr07: 21425601-21427600 Eucalyptus grandis
Eucgr.G01372 2.0kb downstream 2.0kb downstream 4541 true Chr07: 21421060-21425600 Eucalyptus grandis
Eucgr.G01372 2.0kb downstream 2.0kb downstream 2000 false Chr07: 21421060-21423059 Eucalyptus grandis
Eucgr.G01372 5.0kb upstream 5.0kb upstream 7541 true Chr07: 21423060-21430600 Eucalyptus grandis
Eucgr.G01372 5.0kb upstream 5.0kb upstream 5000 false Chr07: 21425601-21430600 Eucalyptus grandis
Eucgr.G01372 5.0kb downstream 5.0kb downstream 7541 true Chr07: 21418060-21425600 Eucalyptus grandis
Eucgr.G01372 5.0kb downstream 5.0kb downstream 5000 false Chr07: 21418060-21423059 Eucalyptus grandis
Eucgr.G01372 10.0kb upstream 10.0kb upstream 12541 true Chr07: 21423060-21435600 Eucalyptus grandis
Eucgr.G01372 10.0kb upstream 10.0kb upstream 10000 false Chr07: 21425601-21435600 Eucalyptus grandis
Eucgr.G01372 10.0kb downstream 10.0kb downstream 12541 true Chr07: 21413060-21425600 Eucalyptus grandis
Eucgr.G01372 10.0kb downstream 10.0kb downstream 10000 false Chr07: 21413060-21423059 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068364 5270 Rosid View MSA
123741624 5271 Pentapetalae View MSA
122794104 5272 Eudicot View MSA
122048579 5273 Angiosperm View MSA
121351446 5274 Embryophyte View MSA
123382170 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.10854 0.0 8.90293    
cufflinks 1.17905 0.0 4.04937   Low
cufflinks 2.89124 0.0 9.57176    
cufflinks 1.58004 0.0 5.05461    
cufflinks 1.28936 0.0 4.36611    
cufflinks 5.61647 0.0 15.1867   High

0 Strain