Gene : Eucgr.G01374 E. grandis v2.0
Defline:  (1 of 3) 3.1.3.16//3.1.3.48//3.1.3.67 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase // Protein-tyrosine-phosphatase / PTPase // Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase / Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase Genomic Order:  928
Name:  ? Eucgr.G01374 Secondary Identifier:  ? PAC:32069993
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6368 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01374 0.5kb upstream 0.5kb upstream 5359 true Chr07: 21428856-21434214 Eucalyptus grandis
Eucgr.G01374 0.5kb upstream 0.5kb upstream 500 false Chr07: 21433715-21434214 Eucalyptus grandis
Eucgr.G01374 0.5kb downstream 0.5kb downstream 5359 true Chr07: 21428356-21433714 Eucalyptus grandis
Eucgr.G01374 0.5kb downstream 0.5kb downstream 500 false Chr07: 21428356-21428855 Eucalyptus grandis
Eucgr.G01374 1.0kb upstream 1.0kb upstream 5859 true Chr07: 21428856-21434714 Eucalyptus grandis
Eucgr.G01374 1.0kb upstream 1.0kb upstream 1000 false Chr07: 21433715-21434714 Eucalyptus grandis
Eucgr.G01374 1.0kb downstream 1.0kb downstream 5859 true Chr07: 21427856-21433714 Eucalyptus grandis
Eucgr.G01374 1.0kb downstream 1.0kb downstream 1000 false Chr07: 21427856-21428855 Eucalyptus grandis
Eucgr.G01374 2.0kb upstream 2.0kb upstream 6859 true Chr07: 21428856-21435714 Eucalyptus grandis
Eucgr.G01374 2.0kb upstream 2.0kb upstream 2000 false Chr07: 21433715-21435714 Eucalyptus grandis
Eucgr.G01374 2.0kb downstream 2.0kb downstream 6859 true Chr07: 21426856-21433714 Eucalyptus grandis
Eucgr.G01374 2.0kb downstream 2.0kb downstream 2000 false Chr07: 21426856-21428855 Eucalyptus grandis
Eucgr.G01374 5.0kb upstream 5.0kb upstream 9859 true Chr07: 21428856-21438714 Eucalyptus grandis
Eucgr.G01374 5.0kb upstream 5.0kb upstream 5000 false Chr07: 21433715-21438714 Eucalyptus grandis
Eucgr.G01374 5.0kb downstream 5.0kb downstream 9859 true Chr07: 21423856-21433714 Eucalyptus grandis
Eucgr.G01374 5.0kb downstream 5.0kb downstream 5000 false Chr07: 21423856-21428855 Eucalyptus grandis
Eucgr.G01374 10.0kb upstream 10.0kb upstream 14859 true Chr07: 21428856-21443714 Eucalyptus grandis
Eucgr.G01374 10.0kb upstream 10.0kb upstream 10000 false Chr07: 21433715-21443714 Eucalyptus grandis
Eucgr.G01374 10.0kb downstream 10.0kb downstream 14859 true Chr07: 21418856-21433714 Eucalyptus grandis
Eucgr.G01374 10.0kb downstream 10.0kb downstream 10000 false Chr07: 21418856-21428855 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064692 5270 Rosid View MSA
123751373 5271 Pentapetalae View MSA
122789391 5272 Eudicot View MSA
122043545 5273 Angiosperm View MSA
121345255 5274 Embryophyte View MSA
123428601 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.449 0.0 36.6383    
cufflinks 30.6716 0.0 67.9169   High
cufflinks 16.7952 0.0 37.3527    
cufflinks 27.3979 0.0 60.6087   High
cufflinks 17.0223 0.0 37.8253    
cufflinks 15.1428 0.0 33.8971    

0 Strain