Gene : Eucgr.G01375 E. grandis v2.0
Defline:  (1 of 1) 1.2.4.2 - Oxoglutarate dehydrogenase (succinyl-transferring) / Oxoglutarate dehydrogenase (lipoamide) Genomic Order:  929
Name:  ? Eucgr.G01375 Secondary Identifier:  ? PAC:32073059
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5084 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01375 0.5kb upstream 0.5kb upstream 7611 true Chr07: 21451035-21458645 Eucalyptus grandis
Eucgr.G01375 0.5kb upstream 0.5kb upstream 500 false Chr07: 21458146-21458645 Eucalyptus grandis
Eucgr.G01375 0.5kb downstream 0.5kb downstream 7611 true Chr07: 21450535-21458145 Eucalyptus grandis
Eucgr.G01375 0.5kb downstream 0.5kb downstream 500 false Chr07: 21450535-21451034 Eucalyptus grandis
Eucgr.G01375 1.0kb upstream 1.0kb upstream 8111 true Chr07: 21451035-21459145 Eucalyptus grandis
Eucgr.G01375 1.0kb upstream 1.0kb upstream 1000 false Chr07: 21458146-21459145 Eucalyptus grandis
Eucgr.G01375 1.0kb downstream 1.0kb downstream 8111 true Chr07: 21450035-21458145 Eucalyptus grandis
Eucgr.G01375 1.0kb downstream 1.0kb downstream 1000 false Chr07: 21450035-21451034 Eucalyptus grandis
Eucgr.G01375 2.0kb upstream 2.0kb upstream 9111 true Chr07: 21451035-21460145 Eucalyptus grandis
Eucgr.G01375 2.0kb upstream 2.0kb upstream 2000 false Chr07: 21458146-21460145 Eucalyptus grandis
Eucgr.G01375 2.0kb downstream 2.0kb downstream 9111 true Chr07: 21449035-21458145 Eucalyptus grandis
Eucgr.G01375 2.0kb downstream 2.0kb downstream 2000 false Chr07: 21449035-21451034 Eucalyptus grandis
Eucgr.G01375 5.0kb upstream 5.0kb upstream 12111 true Chr07: 21451035-21463145 Eucalyptus grandis
Eucgr.G01375 5.0kb upstream 5.0kb upstream 5000 false Chr07: 21458146-21463145 Eucalyptus grandis
Eucgr.G01375 5.0kb downstream 5.0kb downstream 12111 true Chr07: 21446035-21458145 Eucalyptus grandis
Eucgr.G01375 5.0kb downstream 5.0kb downstream 5000 false Chr07: 21446035-21451034 Eucalyptus grandis
Eucgr.G01375 10.0kb upstream 10.0kb upstream 17111 true Chr07: 21451035-21468145 Eucalyptus grandis
Eucgr.G01375 10.0kb upstream 10.0kb upstream 10000 false Chr07: 21458146-21468145 Eucalyptus grandis
Eucgr.G01375 10.0kb downstream 10.0kb downstream 17111 true Chr07: 21441035-21458145 Eucalyptus grandis
Eucgr.G01375 10.0kb downstream 10.0kb downstream 10000 false Chr07: 21441035-21451034 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067534 5270 Rosid View MSA
123744941 5271 Pentapetalae View MSA
122793820 5272 Eudicot View MSA
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.9108 0.0 92.0694 High  
cufflinks 47.0555 0.0 110.525 High High
cufflinks 38.1432 0.0 88.0312 High  
cufflinks 49.7061 0.0 117.746 High High
cufflinks 36.0478 0.0 82.8558    
cufflinks 37.5171 0.0 85.9824 High  

0 Strain