Gene : Eucgr.G01417 E. grandis v2.0
Defline:  (1 of 1) PTHR10509//PTHR10509:SF19 - O-METHYLTRANSFERASE-RELATED Genomic Order:  956
Name:  ? Eucgr.G01417 Secondary Identifier:  ? PAC:32072859
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1121 Eucalyptus grandis pathologic  
Egrandis PWY-361 Eucalyptus grandis pathologic  
Egrandis PWY-7498 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01417 0.5kb upstream 0.5kb upstream 2687 true Chr07: 22725821-22728507 Eucalyptus grandis
Eucgr.G01417 0.5kb upstream 0.5kb upstream 500 false Chr07: 22728008-22728507 Eucalyptus grandis
Eucgr.G01417 0.5kb downstream 0.5kb downstream 2687 true Chr07: 22725321-22728007 Eucalyptus grandis
Eucgr.G01417 0.5kb downstream 0.5kb downstream 500 false Chr07: 22725321-22725820 Eucalyptus grandis
Eucgr.G01417 1.0kb upstream 1.0kb upstream 3187 true Chr07: 22725821-22729007 Eucalyptus grandis
Eucgr.G01417 1.0kb upstream 1.0kb upstream 1000 false Chr07: 22728008-22729007 Eucalyptus grandis
Eucgr.G01417 1.0kb downstream 1.0kb downstream 3187 true Chr07: 22724821-22728007 Eucalyptus grandis
Eucgr.G01417 1.0kb downstream 1.0kb downstream 1000 false Chr07: 22724821-22725820 Eucalyptus grandis
Eucgr.G01417 2.0kb upstream 2.0kb upstream 4187 true Chr07: 22725821-22730007 Eucalyptus grandis
Eucgr.G01417 2.0kb upstream 2.0kb upstream 2000 false Chr07: 22728008-22730007 Eucalyptus grandis
Eucgr.G01417 2.0kb downstream 2.0kb downstream 4187 true Chr07: 22723821-22728007 Eucalyptus grandis
Eucgr.G01417 2.0kb downstream 2.0kb downstream 2000 false Chr07: 22723821-22725820 Eucalyptus grandis
Eucgr.G01417 5.0kb upstream 5.0kb upstream 7187 true Chr07: 22725821-22733007 Eucalyptus grandis
Eucgr.G01417 5.0kb upstream 5.0kb upstream 5000 false Chr07: 22728008-22733007 Eucalyptus grandis
Eucgr.G01417 5.0kb downstream 5.0kb downstream 7187 true Chr07: 22720821-22728007 Eucalyptus grandis
Eucgr.G01417 5.0kb downstream 5.0kb downstream 5000 false Chr07: 22720821-22725820 Eucalyptus grandis
Eucgr.G01417 10.0kb upstream 10.0kb upstream 12187 true Chr07: 22725821-22738007 Eucalyptus grandis
Eucgr.G01417 10.0kb upstream 10.0kb upstream 10000 false Chr07: 22728008-22738007 Eucalyptus grandis
Eucgr.G01417 10.0kb downstream 10.0kb downstream 12187 true Chr07: 22715821-22728007 Eucalyptus grandis
Eucgr.G01417 10.0kb downstream 10.0kb downstream 10000 false Chr07: 22715821-22725820 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070061 5270 Rosid View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.8443 0.0 79.7055 High  
cufflinks 1360.35 0.0 4117.95 High High
cufflinks 29.6698 0.0 66.5325 High  
cufflinks 1108.56 0.0 3190.21 High High
cufflinks 107.877 0.0 241.642 High  
cufflinks 65.4576 0.0 144.96 High  

0 Strain