Gene : Eucgr.G01336 E. grandis v2.0
Defline:  (1 of 18) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  899
Name:  ? Eucgr.G01336 Secondary Identifier:  ? PAC:32070442
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01336 0.5kb upstream 0.5kb upstream 1424 true Chr07: 20702867-20704290 Eucalyptus grandis
Eucgr.G01336 0.5kb upstream 0.5kb upstream 500 false Chr07: 20702867-20703366 Eucalyptus grandis
Eucgr.G01336 0.5kb downstream 0.5kb downstream 1424 true Chr07: 20703367-20704790 Eucalyptus grandis
Eucgr.G01336 0.5kb downstream 0.5kb downstream 500 false Chr07: 20704291-20704790 Eucalyptus grandis
Eucgr.G01336 1.0kb upstream 1.0kb upstream 1924 true Chr07: 20702367-20704290 Eucalyptus grandis
Eucgr.G01336 1.0kb upstream 1.0kb upstream 1000 false Chr07: 20702367-20703366 Eucalyptus grandis
Eucgr.G01336 1.0kb downstream 1.0kb downstream 1924 true Chr07: 20703367-20705290 Eucalyptus grandis
Eucgr.G01336 1.0kb downstream 1.0kb downstream 1000 false Chr07: 20704291-20705290 Eucalyptus grandis
Eucgr.G01336 2.0kb upstream 2.0kb upstream 2924 true Chr07: 20701367-20704290 Eucalyptus grandis
Eucgr.G01336 2.0kb upstream 2.0kb upstream 2000 false Chr07: 20701367-20703366 Eucalyptus grandis
Eucgr.G01336 2.0kb downstream 2.0kb downstream 2924 true Chr07: 20703367-20706290 Eucalyptus grandis
Eucgr.G01336 2.0kb downstream 2.0kb downstream 2000 false Chr07: 20704291-20706290 Eucalyptus grandis
Eucgr.G01336 5.0kb upstream 5.0kb upstream 5924 true Chr07: 20698367-20704290 Eucalyptus grandis
Eucgr.G01336 5.0kb upstream 5.0kb upstream 5000 false Chr07: 20698367-20703366 Eucalyptus grandis
Eucgr.G01336 5.0kb downstream 5.0kb downstream 5924 true Chr07: 20703367-20709290 Eucalyptus grandis
Eucgr.G01336 5.0kb downstream 5.0kb downstream 5000 false Chr07: 20704291-20709290 Eucalyptus grandis
Eucgr.G01336 10.0kb upstream 10.0kb upstream 10924 true Chr07: 20693367-20704290 Eucalyptus grandis
Eucgr.G01336 10.0kb upstream 10.0kb upstream 10000 false Chr07: 20693367-20703366 Eucalyptus grandis
Eucgr.G01336 10.0kb downstream 10.0kb downstream 10924 true Chr07: 20703367-20714290 Eucalyptus grandis
Eucgr.G01336 10.0kb downstream 10.0kb downstream 10000 false Chr07: 20704291-20714290 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062491 5270 Rosid View MSA
123748225 5271 Pentapetalae View MSA
122793503 5272 Eudicot View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2803 0.0 31.3208    
cufflinks 0.935863 0.0 2.90608   Low
cufflinks 30.5474 0.0 68.3469 High High
cufflinks 0.959928 0.0 2.97731    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.12935 0.0 13.2464    

0 Strain