Gene : Eucgr.G01369 E. grandis v2.0
Defline:  (1 of 2) 2.5.1.39 - 4-hydroxybenzoate polyprenyltransferase / 4-hydroxybenzoate nonaprenyltransferase Genomic Order:  923
Name:  ? Eucgr.G01369 Secondary Identifier:  ? PAC:32073098
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5871 Eucalyptus grandis pathologic  
Egrandis PWY-5872 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01369 0.5kb upstream 0.5kb upstream 7719 true Chr07: 21391950-21399668 Eucalyptus grandis
Eucgr.G01369 0.5kb upstream 0.5kb upstream 500 false Chr07: 21399169-21399668 Eucalyptus grandis
Eucgr.G01369 0.5kb downstream 0.5kb downstream 7719 true Chr07: 21391450-21399168 Eucalyptus grandis
Eucgr.G01369 0.5kb downstream 0.5kb downstream 500 false Chr07: 21391450-21391949 Eucalyptus grandis
Eucgr.G01369 1.0kb upstream 1.0kb upstream 8219 true Chr07: 21391950-21400168 Eucalyptus grandis
Eucgr.G01369 1.0kb upstream 1.0kb upstream 1000 false Chr07: 21399169-21400168 Eucalyptus grandis
Eucgr.G01369 1.0kb downstream 1.0kb downstream 8219 true Chr07: 21390950-21399168 Eucalyptus grandis
Eucgr.G01369 1.0kb downstream 1.0kb downstream 1000 false Chr07: 21390950-21391949 Eucalyptus grandis
Eucgr.G01369 2.0kb upstream 2.0kb upstream 9219 true Chr07: 21391950-21401168 Eucalyptus grandis
Eucgr.G01369 2.0kb upstream 2.0kb upstream 2000 false Chr07: 21399169-21401168 Eucalyptus grandis
Eucgr.G01369 2.0kb downstream 2.0kb downstream 9219 true Chr07: 21389950-21399168 Eucalyptus grandis
Eucgr.G01369 2.0kb downstream 2.0kb downstream 2000 false Chr07: 21389950-21391949 Eucalyptus grandis
Eucgr.G01369 5.0kb upstream 5.0kb upstream 12219 true Chr07: 21391950-21404168 Eucalyptus grandis
Eucgr.G01369 5.0kb upstream 5.0kb upstream 5000 false Chr07: 21399169-21404168 Eucalyptus grandis
Eucgr.G01369 5.0kb downstream 5.0kb downstream 12219 true Chr07: 21386950-21399168 Eucalyptus grandis
Eucgr.G01369 5.0kb downstream 5.0kb downstream 5000 false Chr07: 21386950-21391949 Eucalyptus grandis
Eucgr.G01369 10.0kb upstream 10.0kb upstream 17219 true Chr07: 21391950-21409168 Eucalyptus grandis
Eucgr.G01369 10.0kb upstream 10.0kb upstream 10000 false Chr07: 21399169-21409168 Eucalyptus grandis
Eucgr.G01369 10.0kb downstream 10.0kb downstream 17219 true Chr07: 21381950-21399168 Eucalyptus grandis
Eucgr.G01369 10.0kb downstream 10.0kb downstream 10000 false Chr07: 21381950-21391949 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066892 5270 Rosid View MSA
123737843 5271 Pentapetalae View MSA
122788354 5272 Eudicot View MSA
122042592 5273 Angiosperm View MSA
121344514 5274 Embryophyte View MSA
123428392 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.46681 0.0 11.7056    
cufflinks 1.3575 0.0 4.0172   Low
cufflinks 5.05674 0.0 13.1543    
cufflinks 4.84221 0.0 12.6173    
cufflinks 3.3938 0.0 9.16527    
cufflinks 8.1577 0.0 20.0965   High

0 Strain