Gene : Eucgr.G01370 E. grandis v2.0
Defline:  (1 of 1) KOG1522 - RNA polymerase II, subunit POLR2C/RPB3 Genomic Order:  924
Name:  ? Eucgr.G01370 Secondary Identifier:  ? PAC:32071420
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01370 0.5kb upstream 0.5kb upstream 6049 true Chr07: 21400183-21406231 Eucalyptus grandis
Eucgr.G01370 0.5kb upstream 0.5kb upstream 500 false Chr07: 21400183-21400682 Eucalyptus grandis
Eucgr.G01370 0.5kb downstream 0.5kb downstream 6049 true Chr07: 21400683-21406731 Eucalyptus grandis
Eucgr.G01370 0.5kb downstream 0.5kb downstream 500 false Chr07: 21406232-21406731 Eucalyptus grandis
Eucgr.G01370 1.0kb upstream 1.0kb upstream 6549 true Chr07: 21399683-21406231 Eucalyptus grandis
Eucgr.G01370 1.0kb upstream 1.0kb upstream 1000 false Chr07: 21399683-21400682 Eucalyptus grandis
Eucgr.G01370 1.0kb downstream 1.0kb downstream 6549 true Chr07: 21400683-21407231 Eucalyptus grandis
Eucgr.G01370 1.0kb downstream 1.0kb downstream 1000 false Chr07: 21406232-21407231 Eucalyptus grandis
Eucgr.G01370 2.0kb upstream 2.0kb upstream 7549 true Chr07: 21398683-21406231 Eucalyptus grandis
Eucgr.G01370 2.0kb upstream 2.0kb upstream 2000 false Chr07: 21398683-21400682 Eucalyptus grandis
Eucgr.G01370 2.0kb downstream 2.0kb downstream 7549 true Chr07: 21400683-21408231 Eucalyptus grandis
Eucgr.G01370 2.0kb downstream 2.0kb downstream 2000 false Chr07: 21406232-21408231 Eucalyptus grandis
Eucgr.G01370 5.0kb upstream 5.0kb upstream 10549 true Chr07: 21395683-21406231 Eucalyptus grandis
Eucgr.G01370 5.0kb upstream 5.0kb upstream 5000 false Chr07: 21395683-21400682 Eucalyptus grandis
Eucgr.G01370 5.0kb downstream 5.0kb downstream 10549 true Chr07: 21400683-21411231 Eucalyptus grandis
Eucgr.G01370 5.0kb downstream 5.0kb downstream 5000 false Chr07: 21406232-21411231 Eucalyptus grandis
Eucgr.G01370 10.0kb upstream 10.0kb upstream 15549 true Chr07: 21390683-21406231 Eucalyptus grandis
Eucgr.G01370 10.0kb upstream 10.0kb upstream 10000 false Chr07: 21390683-21400682 Eucalyptus grandis
Eucgr.G01370 10.0kb downstream 10.0kb downstream 15549 true Chr07: 21400683-21416231 Eucalyptus grandis
Eucgr.G01370 10.0kb downstream 10.0kb downstream 10000 false Chr07: 21406232-21416231 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066500 5270 Rosid View MSA
123743057 5271 Pentapetalae View MSA
122793148 5272 Eudicot View MSA
122045385 5273 Angiosperm View MSA
121347038 5274 Embryophyte View MSA
123424070 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.4351 0.0 69.925 High High
cufflinks 17.0496 0.0 39.0906    
cufflinks 28.1212 0.0 62.8051 High  
cufflinks 16.2382 0.0 37.4076   Low
cufflinks 19.9746 0.0 45.3915    
cufflinks 22.624 0.0 50.9422    

0 Strain