Gene : Eucgr.G01262 E. grandis v2.0
Defline:  (1 of 2) PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Genomic Order:  849
Name:  ? Eucgr.G01262 Secondary Identifier:  ? PAC:32070595
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01262 0.5kb upstream 0.5kb upstream 6428 true Chr07: 19442211-19448638 Eucalyptus grandis
Eucgr.G01262 0.5kb upstream 0.5kb upstream 500 false Chr07: 19448139-19448638 Eucalyptus grandis
Eucgr.G01262 0.5kb downstream 0.5kb downstream 6428 true Chr07: 19441711-19448138 Eucalyptus grandis
Eucgr.G01262 0.5kb downstream 0.5kb downstream 500 false Chr07: 19441711-19442210 Eucalyptus grandis
Eucgr.G01262 1.0kb upstream 1.0kb upstream 6928 true Chr07: 19442211-19449138 Eucalyptus grandis
Eucgr.G01262 1.0kb upstream 1.0kb upstream 1000 false Chr07: 19448139-19449138 Eucalyptus grandis
Eucgr.G01262 1.0kb downstream 1.0kb downstream 6928 true Chr07: 19441211-19448138 Eucalyptus grandis
Eucgr.G01262 1.0kb downstream 1.0kb downstream 1000 false Chr07: 19441211-19442210 Eucalyptus grandis
Eucgr.G01262 2.0kb upstream 2.0kb upstream 7928 true Chr07: 19442211-19450138 Eucalyptus grandis
Eucgr.G01262 2.0kb upstream 2.0kb upstream 2000 false Chr07: 19448139-19450138 Eucalyptus grandis
Eucgr.G01262 2.0kb downstream 2.0kb downstream 7928 true Chr07: 19440211-19448138 Eucalyptus grandis
Eucgr.G01262 2.0kb downstream 2.0kb downstream 2000 false Chr07: 19440211-19442210 Eucalyptus grandis
Eucgr.G01262 5.0kb upstream 5.0kb upstream 10928 true Chr07: 19442211-19453138 Eucalyptus grandis
Eucgr.G01262 5.0kb upstream 5.0kb upstream 5000 false Chr07: 19448139-19453138 Eucalyptus grandis
Eucgr.G01262 5.0kb downstream 5.0kb downstream 10928 true Chr07: 19437211-19448138 Eucalyptus grandis
Eucgr.G01262 5.0kb downstream 5.0kb downstream 5000 false Chr07: 19437211-19442210 Eucalyptus grandis
Eucgr.G01262 10.0kb upstream 10.0kb upstream 15928 true Chr07: 19442211-19458138 Eucalyptus grandis
Eucgr.G01262 10.0kb upstream 10.0kb upstream 10000 false Chr07: 19448139-19458138 Eucalyptus grandis
Eucgr.G01262 10.0kb downstream 10.0kb downstream 15928 true Chr07: 19432211-19448138 Eucalyptus grandis
Eucgr.G01262 10.0kb downstream 10.0kb downstream 10000 false Chr07: 19432211-19442210 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065184 5270 Rosid View MSA
123747124 5271 Pentapetalae View MSA
122796341 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.58463 0.0 10.6669    
cufflinks 20.6954 0.0 55.4135   High
cufflinks 1.87888 0.0 5.17084    
cufflinks 7.39263 0.0 17.9326    
cufflinks 1.09683 0.0 3.18323   Low
cufflinks 4.41511 0.0 10.5189    

0 Strain