Gene : Eucgr.G01249 E. grandis v2.0
Defline:  (1 of 1) PTHR32370:SF4 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 Genomic Order:  841
Name:  ? Eucgr.G01249 Secondary Identifier:  ? PAC:32071816
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01249 0.5kb upstream 0.5kb upstream 4940 true Chr07: 19200715-19205654 Eucalyptus grandis
Eucgr.G01249 0.5kb upstream 0.5kb upstream 500 false Chr07: 19200715-19201214 Eucalyptus grandis
Eucgr.G01249 0.5kb downstream 0.5kb downstream 4940 true Chr07: 19201215-19206154 Eucalyptus grandis
Eucgr.G01249 0.5kb downstream 0.5kb downstream 500 false Chr07: 19205655-19206154 Eucalyptus grandis
Eucgr.G01249 1.0kb upstream 1.0kb upstream 5440 true Chr07: 19200215-19205654 Eucalyptus grandis
Eucgr.G01249 1.0kb upstream 1.0kb upstream 1000 false Chr07: 19200215-19201214 Eucalyptus grandis
Eucgr.G01249 1.0kb downstream 1.0kb downstream 5440 true Chr07: 19201215-19206654 Eucalyptus grandis
Eucgr.G01249 1.0kb downstream 1.0kb downstream 1000 false Chr07: 19205655-19206654 Eucalyptus grandis
Eucgr.G01249 2.0kb upstream 2.0kb upstream 6440 true Chr07: 19199215-19205654 Eucalyptus grandis
Eucgr.G01249 2.0kb upstream 2.0kb upstream 2000 false Chr07: 19199215-19201214 Eucalyptus grandis
Eucgr.G01249 2.0kb downstream 2.0kb downstream 6440 true Chr07: 19201215-19207654 Eucalyptus grandis
Eucgr.G01249 2.0kb downstream 2.0kb downstream 2000 false Chr07: 19205655-19207654 Eucalyptus grandis
Eucgr.G01249 5.0kb upstream 5.0kb upstream 9440 true Chr07: 19196215-19205654 Eucalyptus grandis
Eucgr.G01249 5.0kb upstream 5.0kb upstream 5000 false Chr07: 19196215-19201214 Eucalyptus grandis
Eucgr.G01249 5.0kb downstream 5.0kb downstream 9440 true Chr07: 19201215-19210654 Eucalyptus grandis
Eucgr.G01249 5.0kb downstream 5.0kb downstream 5000 false Chr07: 19205655-19210654 Eucalyptus grandis
Eucgr.G01249 10.0kb upstream 10.0kb upstream 14440 true Chr07: 19191215-19205654 Eucalyptus grandis
Eucgr.G01249 10.0kb upstream 10.0kb upstream 10000 false Chr07: 19191215-19201214 Eucalyptus grandis
Eucgr.G01249 10.0kb downstream 10.0kb downstream 14440 true Chr07: 19201215-19215654 Eucalyptus grandis
Eucgr.G01249 10.0kb downstream 10.0kb downstream 10000 false Chr07: 19205655-19215654 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069258 5270 Rosid View MSA
123743807 5271 Pentapetalae View MSA
122790043 5272 Eudicot View MSA
122047329 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3491 0.0 29.6454    
cufflinks 8.49641 0.0 19.1873    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 11.0463 0.0 24.6491    
cufflinks 0.297073 0.0 0.930903 Low Low
cufflinks 1.36405 0.0 3.63591    

0 Strain