Gene : Eucgr.G01203 E. grandis v2.0
Defline:  (1 of 2) PF05479 - Photosystem I reaction centre subunit N (PSAN or PSI-N) (PsaN) Genomic Order:  804
Name:  ? Eucgr.G01203 Secondary Identifier:  ? PAC:32071562
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01203 0.5kb upstream 0.5kb upstream 1885 true Chr07: 18355533-18357417 Eucalyptus grandis
Eucgr.G01203 0.5kb upstream 0.5kb upstream 500 false Chr07: 18355533-18356032 Eucalyptus grandis
Eucgr.G01203 0.5kb downstream 0.5kb downstream 1885 true Chr07: 18356033-18357917 Eucalyptus grandis
Eucgr.G01203 0.5kb downstream 0.5kb downstream 500 false Chr07: 18357418-18357917 Eucalyptus grandis
Eucgr.G01203 1.0kb upstream 1.0kb upstream 2385 true Chr07: 18355033-18357417 Eucalyptus grandis
Eucgr.G01203 1.0kb upstream 1.0kb upstream 1000 false Chr07: 18355033-18356032 Eucalyptus grandis
Eucgr.G01203 1.0kb downstream 1.0kb downstream 2385 true Chr07: 18356033-18358417 Eucalyptus grandis
Eucgr.G01203 1.0kb downstream 1.0kb downstream 1000 false Chr07: 18357418-18358417 Eucalyptus grandis
Eucgr.G01203 2.0kb upstream 2.0kb upstream 3385 true Chr07: 18354033-18357417 Eucalyptus grandis
Eucgr.G01203 2.0kb upstream 2.0kb upstream 2000 false Chr07: 18354033-18356032 Eucalyptus grandis
Eucgr.G01203 2.0kb downstream 2.0kb downstream 3385 true Chr07: 18356033-18359417 Eucalyptus grandis
Eucgr.G01203 2.0kb downstream 2.0kb downstream 2000 false Chr07: 18357418-18359417 Eucalyptus grandis
Eucgr.G01203 5.0kb upstream 5.0kb upstream 6385 true Chr07: 18351033-18357417 Eucalyptus grandis
Eucgr.G01203 5.0kb upstream 5.0kb upstream 5000 false Chr07: 18351033-18356032 Eucalyptus grandis
Eucgr.G01203 5.0kb downstream 5.0kb downstream 6385 true Chr07: 18356033-18362417 Eucalyptus grandis
Eucgr.G01203 5.0kb downstream 5.0kb downstream 5000 false Chr07: 18357418-18362417 Eucalyptus grandis
Eucgr.G01203 10.0kb upstream 10.0kb upstream 11385 true Chr07: 18346033-18357417 Eucalyptus grandis
Eucgr.G01203 10.0kb upstream 10.0kb upstream 10000 false Chr07: 18346033-18356032 Eucalyptus grandis
Eucgr.G01203 10.0kb downstream 10.0kb downstream 11385 true Chr07: 18356033-18367417 Eucalyptus grandis
Eucgr.G01203 10.0kb downstream 10.0kb downstream 10000 false Chr07: 18357418-18367417 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067734 5270 Rosid View MSA
123736810 5271 Pentapetalae View MSA
122791162 5272 Eudicot View MSA
122050730 5273 Angiosperm View MSA
121348092 5274 Embryophyte View MSA
123425572 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5943 0.0 41.5235    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.6292 0.0 7.82747   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 31.8613 0.0 84.8175    

0 Strain