Gene : Eucgr.G02212 E. grandis v2.0
Defline:  (1 of 1) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Genomic Order:  1773
Name:  ? Eucgr.G02212 Secondary Identifier:  ? PAC:32072900
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02212 0.5kb upstream 0.5kb upstream 5411 true Chr07: 42241874-42247284 Eucalyptus grandis
Eucgr.G02212 0.5kb upstream 0.5kb upstream 500 false Chr07: 42241874-42242373 Eucalyptus grandis
Eucgr.G02212 0.5kb downstream 0.5kb downstream 5411 true Chr07: 42242374-42247784 Eucalyptus grandis
Eucgr.G02212 0.5kb downstream 0.5kb downstream 500 false Chr07: 42247285-42247784 Eucalyptus grandis
Eucgr.G02212 1.0kb upstream 1.0kb upstream 5911 true Chr07: 42241374-42247284 Eucalyptus grandis
Eucgr.G02212 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42241374-42242373 Eucalyptus grandis
Eucgr.G02212 1.0kb downstream 1.0kb downstream 5911 true Chr07: 42242374-42248284 Eucalyptus grandis
Eucgr.G02212 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42247285-42248284 Eucalyptus grandis
Eucgr.G02212 2.0kb upstream 2.0kb upstream 6911 true Chr07: 42240374-42247284 Eucalyptus grandis
Eucgr.G02212 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42240374-42242373 Eucalyptus grandis
Eucgr.G02212 2.0kb downstream 2.0kb downstream 6911 true Chr07: 42242374-42249284 Eucalyptus grandis
Eucgr.G02212 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42247285-42249284 Eucalyptus grandis
Eucgr.G02212 5.0kb upstream 5.0kb upstream 9911 true Chr07: 42237374-42247284 Eucalyptus grandis
Eucgr.G02212 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42237374-42242373 Eucalyptus grandis
Eucgr.G02212 5.0kb downstream 5.0kb downstream 9911 true Chr07: 42242374-42252284 Eucalyptus grandis
Eucgr.G02212 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42247285-42252284 Eucalyptus grandis
Eucgr.G02212 10.0kb upstream 10.0kb upstream 14911 true Chr07: 42232374-42247284 Eucalyptus grandis
Eucgr.G02212 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42232374-42242373 Eucalyptus grandis
Eucgr.G02212 10.0kb downstream 10.0kb downstream 14911 true Chr07: 42242374-42257284 Eucalyptus grandis
Eucgr.G02212 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42247285-42257284 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066988 5270 Rosid View MSA
123748418 5271 Pentapetalae View MSA
122792340 5272 Eudicot View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.066 0.0 87.0426 High  
cufflinks 11.756 0.0 27.6137   Low
cufflinks 26.2764 0.0 64.2209 High  
cufflinks 25.5191 0.0 62.1848    
cufflinks 17.9127 0.0 43.5523    
cufflinks 36.3515 0.0 93.1902 High  

0 Strain