Gene : Eucgr.G02185 E. grandis v2.0
Defline:  (1 of 1) PTHR24031:SF50 - DEAD/DEAH BOX RNA HELICASE FAMILY PROTEIN Genomic Order:  1749
Name:  ? Eucgr.G02185 Secondary Identifier:  ? PAC:32072806
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02185 0.5kb upstream 0.5kb upstream 13759 true Chr07: 41885581-41899339 Eucalyptus grandis
Eucgr.G02185 0.5kb upstream 0.5kb upstream 500 false Chr07: 41885581-41886080 Eucalyptus grandis
Eucgr.G02185 0.5kb downstream 0.5kb downstream 13759 true Chr07: 41886081-41899839 Eucalyptus grandis
Eucgr.G02185 0.5kb downstream 0.5kb downstream 500 false Chr07: 41899340-41899839 Eucalyptus grandis
Eucgr.G02185 1.0kb upstream 1.0kb upstream 14259 true Chr07: 41885081-41899339 Eucalyptus grandis
Eucgr.G02185 1.0kb upstream 1.0kb upstream 1000 false Chr07: 41885081-41886080 Eucalyptus grandis
Eucgr.G02185 1.0kb downstream 1.0kb downstream 14259 true Chr07: 41886081-41900339 Eucalyptus grandis
Eucgr.G02185 1.0kb downstream 1.0kb downstream 1000 false Chr07: 41899340-41900339 Eucalyptus grandis
Eucgr.G02185 2.0kb upstream 2.0kb upstream 15259 true Chr07: 41884081-41899339 Eucalyptus grandis
Eucgr.G02185 2.0kb upstream 2.0kb upstream 2000 false Chr07: 41884081-41886080 Eucalyptus grandis
Eucgr.G02185 2.0kb downstream 2.0kb downstream 15259 true Chr07: 41886081-41901339 Eucalyptus grandis
Eucgr.G02185 2.0kb downstream 2.0kb downstream 2000 false Chr07: 41899340-41901339 Eucalyptus grandis
Eucgr.G02185 5.0kb upstream 5.0kb upstream 18259 true Chr07: 41881081-41899339 Eucalyptus grandis
Eucgr.G02185 5.0kb upstream 5.0kb upstream 5000 false Chr07: 41881081-41886080 Eucalyptus grandis
Eucgr.G02185 5.0kb downstream 5.0kb downstream 18259 true Chr07: 41886081-41904339 Eucalyptus grandis
Eucgr.G02185 5.0kb downstream 5.0kb downstream 5000 false Chr07: 41899340-41904339 Eucalyptus grandis
Eucgr.G02185 10.0kb upstream 10.0kb upstream 23259 true Chr07: 41876081-41899339 Eucalyptus grandis
Eucgr.G02185 10.0kb upstream 10.0kb upstream 10000 false Chr07: 41876081-41886080 Eucalyptus grandis
Eucgr.G02185 10.0kb downstream 10.0kb downstream 23259 true Chr07: 41886081-41909339 Eucalyptus grandis
Eucgr.G02185 10.0kb downstream 10.0kb downstream 10000 false Chr07: 41899340-41909339 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041472 5273 Angiosperm View MSA
124072269 5270 Rosid View MSA
123749216 5271 Pentapetalae View MSA
122790449 5272 Eudicot View MSA
121349019 5274 Embryophyte View MSA
123425837 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.68848 0.0 11.7505    
cufflinks 4.31168 0.0 10.0077    
cufflinks 4.80822 0.0 11.1045    
cufflinks 3.4602 0.0 10.8015   Low
cufflinks 5.30483 0.0 13.7935    
cufflinks 9.47204 0.0 24.3301   High

0 Strain