Gene : Eucgr.G02157 E. grandis v2.0
Defline:  (1 of 2) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Genomic Order:  1722
Name:  ? Eucgr.G02157 Secondary Identifier:  ? PAC:32070498
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLUCOSE1PMETAB-PWY Eucalyptus grandis pathologic  
Egrandis GLYCOGENSYNTH-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3801 Eucalyptus grandis pathologic  
Egrandis PWY-622 Eucalyptus grandis pathologic  
Egrandis PWY66-422 Eucalyptus grandis pathologic  
Egrandis PWY-7238 Eucalyptus grandis pathologic  
Egrandis PWY-7343 Eucalyptus grandis pathologic  
Egrandis SUCSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02157 0.5kb upstream 0.5kb upstream 12119 true Chr07: 41498390-41510508 Eucalyptus grandis
Eucgr.G02157 0.5kb upstream 0.5kb upstream 500 false Chr07: 41510009-41510508 Eucalyptus grandis
Eucgr.G02157 0.5kb downstream 0.5kb downstream 12119 true Chr07: 41497890-41510008 Eucalyptus grandis
Eucgr.G02157 0.5kb downstream 0.5kb downstream 500 false Chr07: 41497890-41498389 Eucalyptus grandis
Eucgr.G02157 1.0kb upstream 1.0kb upstream 12619 true Chr07: 41498390-41511008 Eucalyptus grandis
Eucgr.G02157 1.0kb upstream 1.0kb upstream 1000 false Chr07: 41510009-41511008 Eucalyptus grandis
Eucgr.G02157 1.0kb downstream 1.0kb downstream 12619 true Chr07: 41497390-41510008 Eucalyptus grandis
Eucgr.G02157 1.0kb downstream 1.0kb downstream 1000 false Chr07: 41497390-41498389 Eucalyptus grandis
Eucgr.G02157 2.0kb upstream 2.0kb upstream 13619 true Chr07: 41498390-41512008 Eucalyptus grandis
Eucgr.G02157 2.0kb upstream 2.0kb upstream 2000 false Chr07: 41510009-41512008 Eucalyptus grandis
Eucgr.G02157 2.0kb downstream 2.0kb downstream 13619 true Chr07: 41496390-41510008 Eucalyptus grandis
Eucgr.G02157 2.0kb downstream 2.0kb downstream 2000 false Chr07: 41496390-41498389 Eucalyptus grandis
Eucgr.G02157 5.0kb upstream 5.0kb upstream 16619 true Chr07: 41498390-41515008 Eucalyptus grandis
Eucgr.G02157 5.0kb upstream 5.0kb upstream 5000 false Chr07: 41510009-41515008 Eucalyptus grandis
Eucgr.G02157 5.0kb downstream 5.0kb downstream 16619 true Chr07: 41493390-41510008 Eucalyptus grandis
Eucgr.G02157 5.0kb downstream 5.0kb downstream 5000 false Chr07: 41493390-41498389 Eucalyptus grandis
Eucgr.G02157 10.0kb upstream 10.0kb upstream 21619 true Chr07: 41498390-41520008 Eucalyptus grandis
Eucgr.G02157 10.0kb upstream 10.0kb upstream 10000 false Chr07: 41510009-41520008 Eucalyptus grandis
Eucgr.G02157 10.0kb downstream 10.0kb downstream 21619 true Chr07: 41488390-41510008 Eucalyptus grandis
Eucgr.G02157 10.0kb downstream 10.0kb downstream 10000 false Chr07: 41488390-41498389 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1373 0.0 38.6504    
cufflinks 58.3107 0.0 133.122 High  
cufflinks 19.3835 0.0 48.7321    
cufflinks 74.9855 0.0 174.442 High High
cufflinks 40.5015 0.0 102.451 High  
cufflinks 12.118 0.0 28.032   Low

0 Strain