Gene : Eucgr.G02114 E. grandis v2.0
Defline:  (1 of 1) PTHR23153:SF39 - CDC48-INTERACTING UBX-DOMAIN PROTEIN Genomic Order:  1689
Name:  ? Eucgr.G02114 Secondary Identifier:  ? PAC:32072014
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02114 0.5kb upstream 0.5kb upstream 5626 true Chr07: 40892196-40897821 Eucalyptus grandis
Eucgr.G02114 0.5kb upstream 0.5kb upstream 500 false Chr07: 40892196-40892695 Eucalyptus grandis
Eucgr.G02114 0.5kb downstream 0.5kb downstream 5626 true Chr07: 40892696-40898321 Eucalyptus grandis
Eucgr.G02114 0.5kb downstream 0.5kb downstream 500 false Chr07: 40897822-40898321 Eucalyptus grandis
Eucgr.G02114 1.0kb upstream 1.0kb upstream 6126 true Chr07: 40891696-40897821 Eucalyptus grandis
Eucgr.G02114 1.0kb upstream 1.0kb upstream 1000 false Chr07: 40891696-40892695 Eucalyptus grandis
Eucgr.G02114 1.0kb downstream 1.0kb downstream 6126 true Chr07: 40892696-40898821 Eucalyptus grandis
Eucgr.G02114 1.0kb downstream 1.0kb downstream 1000 false Chr07: 40897822-40898821 Eucalyptus grandis
Eucgr.G02114 2.0kb upstream 2.0kb upstream 7126 true Chr07: 40890696-40897821 Eucalyptus grandis
Eucgr.G02114 2.0kb upstream 2.0kb upstream 2000 false Chr07: 40890696-40892695 Eucalyptus grandis
Eucgr.G02114 2.0kb downstream 2.0kb downstream 7126 true Chr07: 40892696-40899821 Eucalyptus grandis
Eucgr.G02114 2.0kb downstream 2.0kb downstream 2000 false Chr07: 40897822-40899821 Eucalyptus grandis
Eucgr.G02114 5.0kb upstream 5.0kb upstream 10126 true Chr07: 40887696-40897821 Eucalyptus grandis
Eucgr.G02114 5.0kb upstream 5.0kb upstream 5000 false Chr07: 40887696-40892695 Eucalyptus grandis
Eucgr.G02114 5.0kb downstream 5.0kb downstream 10126 true Chr07: 40892696-40902821 Eucalyptus grandis
Eucgr.G02114 5.0kb downstream 5.0kb downstream 5000 false Chr07: 40897822-40902821 Eucalyptus grandis
Eucgr.G02114 10.0kb upstream 10.0kb upstream 15126 true Chr07: 40882696-40897821 Eucalyptus grandis
Eucgr.G02114 10.0kb upstream 10.0kb upstream 10000 false Chr07: 40882696-40892695 Eucalyptus grandis
Eucgr.G02114 10.0kb downstream 10.0kb downstream 15126 true Chr07: 40892696-40907821 Eucalyptus grandis
Eucgr.G02114 10.0kb downstream 10.0kb downstream 10000 false Chr07: 40897822-40907821 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062974 5270 Rosid View MSA
123738229 5271 Pentapetalae View MSA
122787429 5272 Eudicot View MSA
122047714 5273 Angiosperm View MSA
121346643 5274 Embryophyte View MSA
123428120 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2469 0.0 36.0634    
cufflinks 11.1987 0.0 25.1597    
cufflinks 12.6948 0.0 28.3785    
cufflinks 12.0707 0.0 27.02    
cufflinks 9.0108 0.0 20.5058   Low
cufflinks 22.9381 0.0 50.726   High

0 Strain