Gene : Eucgr.G02078 E. grandis v2.0
Defline:  (1 of 31) PF00069//PF00954//PF01453 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) Genomic Order:  1655
Name:  ? Eucgr.G02078 Secondary Identifier:  ? PAC:32071117
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02078 0.5kb upstream 0.5kb upstream 3056 true Chr07: 40455063-40458118 Eucalyptus grandis
Eucgr.G02078 0.5kb upstream 0.5kb upstream 500 false Chr07: 40455063-40455562 Eucalyptus grandis
Eucgr.G02078 0.5kb downstream 0.5kb downstream 3056 true Chr07: 40455563-40458618 Eucalyptus grandis
Eucgr.G02078 0.5kb downstream 0.5kb downstream 500 false Chr07: 40458119-40458618 Eucalyptus grandis
Eucgr.G02078 1.0kb upstream 1.0kb upstream 3556 true Chr07: 40454563-40458118 Eucalyptus grandis
Eucgr.G02078 1.0kb upstream 1.0kb upstream 1000 false Chr07: 40454563-40455562 Eucalyptus grandis
Eucgr.G02078 1.0kb downstream 1.0kb downstream 3556 true Chr07: 40455563-40459118 Eucalyptus grandis
Eucgr.G02078 1.0kb downstream 1.0kb downstream 1000 false Chr07: 40458119-40459118 Eucalyptus grandis
Eucgr.G02078 2.0kb upstream 2.0kb upstream 4556 true Chr07: 40453563-40458118 Eucalyptus grandis
Eucgr.G02078 2.0kb upstream 2.0kb upstream 2000 false Chr07: 40453563-40455562 Eucalyptus grandis
Eucgr.G02078 2.0kb downstream 2.0kb downstream 4556 true Chr07: 40455563-40460118 Eucalyptus grandis
Eucgr.G02078 2.0kb downstream 2.0kb downstream 2000 false Chr07: 40458119-40460118 Eucalyptus grandis
Eucgr.G02078 5.0kb upstream 5.0kb upstream 7556 true Chr07: 40450563-40458118 Eucalyptus grandis
Eucgr.G02078 5.0kb upstream 5.0kb upstream 5000 false Chr07: 40450563-40455562 Eucalyptus grandis
Eucgr.G02078 5.0kb downstream 5.0kb downstream 7556 true Chr07: 40455563-40463118 Eucalyptus grandis
Eucgr.G02078 5.0kb downstream 5.0kb downstream 5000 false Chr07: 40458119-40463118 Eucalyptus grandis
Eucgr.G02078 10.0kb upstream 10.0kb upstream 12556 true Chr07: 40445563-40458118 Eucalyptus grandis
Eucgr.G02078 10.0kb upstream 10.0kb upstream 10000 false Chr07: 40445563-40455562 Eucalyptus grandis
Eucgr.G02078 10.0kb downstream 10.0kb downstream 12556 true Chr07: 40455563-40468118 Eucalyptus grandis
Eucgr.G02078 10.0kb downstream 10.0kb downstream 10000 false Chr07: 40458119-40468118 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070740 5270 Rosid View MSA
123745678 5271 Pentapetalae View MSA
122771601 5272 Eudicot View MSA
122048307 5273 Angiosperm View MSA
121310924 5274 Embryophyte View MSA
123348296 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5505 0.0 30.0503    
cufflinks 13.0587 0.0 29.0613    
cufflinks 1.43381 0.0 3.87319    
cufflinks 13.0535 0.0 29.1526    
cufflinks 0.211575 0.0 0.717544 Low Low
cufflinks 0.113918 0.0 0.416406 Low Low

0 Strain