Gene : Eucgr.G02080 E. grandis v2.0
Defline:  (1 of 1) PTHR31065:SF15 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  1657
Name:  ? Eucgr.G02080 Secondary Identifier:  ? PAC:32070428
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02080 0.5kb upstream 0.5kb upstream 3505 true Chr07: 40469199-40472703 Eucalyptus grandis
Eucgr.G02080 0.5kb upstream 0.5kb upstream 500 false Chr07: 40469199-40469698 Eucalyptus grandis
Eucgr.G02080 0.5kb downstream 0.5kb downstream 3505 true Chr07: 40469699-40473203 Eucalyptus grandis
Eucgr.G02080 0.5kb downstream 0.5kb downstream 500 false Chr07: 40472704-40473203 Eucalyptus grandis
Eucgr.G02080 1.0kb upstream 1.0kb upstream 4005 true Chr07: 40468699-40472703 Eucalyptus grandis
Eucgr.G02080 1.0kb upstream 1.0kb upstream 1000 false Chr07: 40468699-40469698 Eucalyptus grandis
Eucgr.G02080 1.0kb downstream 1.0kb downstream 4005 true Chr07: 40469699-40473703 Eucalyptus grandis
Eucgr.G02080 1.0kb downstream 1.0kb downstream 1000 false Chr07: 40472704-40473703 Eucalyptus grandis
Eucgr.G02080 2.0kb upstream 2.0kb upstream 5005 true Chr07: 40467699-40472703 Eucalyptus grandis
Eucgr.G02080 2.0kb upstream 2.0kb upstream 2000 false Chr07: 40467699-40469698 Eucalyptus grandis
Eucgr.G02080 2.0kb downstream 2.0kb downstream 5005 true Chr07: 40469699-40474703 Eucalyptus grandis
Eucgr.G02080 2.0kb downstream 2.0kb downstream 2000 false Chr07: 40472704-40474703 Eucalyptus grandis
Eucgr.G02080 5.0kb upstream 5.0kb upstream 8005 true Chr07: 40464699-40472703 Eucalyptus grandis
Eucgr.G02080 5.0kb upstream 5.0kb upstream 5000 false Chr07: 40464699-40469698 Eucalyptus grandis
Eucgr.G02080 5.0kb downstream 5.0kb downstream 8005 true Chr07: 40469699-40477703 Eucalyptus grandis
Eucgr.G02080 5.0kb downstream 5.0kb downstream 5000 false Chr07: 40472704-40477703 Eucalyptus grandis
Eucgr.G02080 10.0kb upstream 10.0kb upstream 13005 true Chr07: 40459699-40472703 Eucalyptus grandis
Eucgr.G02080 10.0kb upstream 10.0kb upstream 10000 false Chr07: 40459699-40469698 Eucalyptus grandis
Eucgr.G02080 10.0kb downstream 10.0kb downstream 13005 true Chr07: 40469699-40482703 Eucalyptus grandis
Eucgr.G02080 10.0kb downstream 10.0kb downstream 10000 false Chr07: 40472704-40482703 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791790 5273 Angiosperm View MSA
124061257 5270 Rosid View MSA
123743284 5271 Pentapetalae View MSA
122793533 5272 Eudicot View MSA
121063080 5274 Embryophyte View MSA
123102864 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.32707 0.0 8.66181    
cufflinks 0.406648 0.0 1.34795   Low
cufflinks 1.08843 0.0 3.19346    
cufflinks 9.02253 0.0 21.3313   High
cufflinks 2.04057 0.0 5.60685    

0 Strain