Gene : Eucgr.G02045 E. grandis v2.0
Defline:  (1 of 1) PTHR13452//PTHR13452:SF9 - THUMP DOMAIN CONTAINING PROTEIN 1-RELATED Genomic Order:  1629
Name:  ? Eucgr.G02045 Secondary Identifier:  ? PAC:32071704
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02045 0.5kb upstream 0.5kb upstream 4354 true Chr07: 39883056-39887409 Eucalyptus grandis
Eucgr.G02045 0.5kb upstream 0.5kb upstream 500 false Chr07: 39883056-39883555 Eucalyptus grandis
Eucgr.G02045 0.5kb downstream 0.5kb downstream 4354 true Chr07: 39883556-39887909 Eucalyptus grandis
Eucgr.G02045 0.5kb downstream 0.5kb downstream 500 false Chr07: 39887410-39887909 Eucalyptus grandis
Eucgr.G02045 1.0kb upstream 1.0kb upstream 4854 true Chr07: 39882556-39887409 Eucalyptus grandis
Eucgr.G02045 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39882556-39883555 Eucalyptus grandis
Eucgr.G02045 1.0kb downstream 1.0kb downstream 4854 true Chr07: 39883556-39888409 Eucalyptus grandis
Eucgr.G02045 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39887410-39888409 Eucalyptus grandis
Eucgr.G02045 2.0kb upstream 2.0kb upstream 5854 true Chr07: 39881556-39887409 Eucalyptus grandis
Eucgr.G02045 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39881556-39883555 Eucalyptus grandis
Eucgr.G02045 2.0kb downstream 2.0kb downstream 5854 true Chr07: 39883556-39889409 Eucalyptus grandis
Eucgr.G02045 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39887410-39889409 Eucalyptus grandis
Eucgr.G02045 5.0kb upstream 5.0kb upstream 8854 true Chr07: 39878556-39887409 Eucalyptus grandis
Eucgr.G02045 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39878556-39883555 Eucalyptus grandis
Eucgr.G02045 5.0kb downstream 5.0kb downstream 8854 true Chr07: 39883556-39892409 Eucalyptus grandis
Eucgr.G02045 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39887410-39892409 Eucalyptus grandis
Eucgr.G02045 10.0kb upstream 10.0kb upstream 13854 true Chr07: 39873556-39887409 Eucalyptus grandis
Eucgr.G02045 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39873556-39883555 Eucalyptus grandis
Eucgr.G02045 10.0kb downstream 10.0kb downstream 13854 true Chr07: 39883556-39897409 Eucalyptus grandis
Eucgr.G02045 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39887410-39897409 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066599 5270 Rosid View MSA
123741347 5271 Pentapetalae View MSA
122792155 5272 Eudicot View MSA
122045801 5273 Angiosperm View MSA
121345171 5274 Embryophyte View MSA
123380169 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.54253 0.0 21.0127    
cufflinks 3.64092 0.0 11.4955   Low
cufflinks 7.75279 0.0 21.4972    
cufflinks 3.65201 0.0 13.051   Low
cufflinks 8.70514 0.0 26.1647    
cufflinks 9.83654 0.0 26.0662    

0 Strain