Gene : Eucgr.G02002 E. grandis v2.0
Defline:  (1 of 2) PTHR21529 - MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 Genomic Order:  1595
Name:  ? Eucgr.G02002 Secondary Identifier:  ? PAC:32071134
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02002 0.5kb upstream 0.5kb upstream 10561 true Chr07: 38675213-38685773 Eucalyptus grandis
Eucgr.G02002 0.5kb upstream 0.5kb upstream 500 false Chr07: 38685274-38685773 Eucalyptus grandis
Eucgr.G02002 0.5kb downstream 0.5kb downstream 10561 true Chr07: 38674713-38685273 Eucalyptus grandis
Eucgr.G02002 0.5kb downstream 0.5kb downstream 500 false Chr07: 38674713-38675212 Eucalyptus grandis
Eucgr.G02002 1.0kb upstream 1.0kb upstream 11061 true Chr07: 38675213-38686273 Eucalyptus grandis
Eucgr.G02002 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38685274-38686273 Eucalyptus grandis
Eucgr.G02002 1.0kb downstream 1.0kb downstream 11061 true Chr07: 38674213-38685273 Eucalyptus grandis
Eucgr.G02002 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38674213-38675212 Eucalyptus grandis
Eucgr.G02002 2.0kb upstream 2.0kb upstream 12061 true Chr07: 38675213-38687273 Eucalyptus grandis
Eucgr.G02002 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38685274-38687273 Eucalyptus grandis
Eucgr.G02002 2.0kb downstream 2.0kb downstream 12061 true Chr07: 38673213-38685273 Eucalyptus grandis
Eucgr.G02002 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38673213-38675212 Eucalyptus grandis
Eucgr.G02002 5.0kb upstream 5.0kb upstream 15061 true Chr07: 38675213-38690273 Eucalyptus grandis
Eucgr.G02002 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38685274-38690273 Eucalyptus grandis
Eucgr.G02002 5.0kb downstream 5.0kb downstream 15061 true Chr07: 38670213-38685273 Eucalyptus grandis
Eucgr.G02002 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38670213-38675212 Eucalyptus grandis
Eucgr.G02002 10.0kb upstream 10.0kb upstream 20061 true Chr07: 38675213-38695273 Eucalyptus grandis
Eucgr.G02002 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38685274-38695273 Eucalyptus grandis
Eucgr.G02002 10.0kb downstream 10.0kb downstream 20061 true Chr07: 38665213-38685273 Eucalyptus grandis
Eucgr.G02002 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38665213-38675212 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051016 5270 Rosid View MSA
123753543 5271 Pentapetalae View MSA
122797869 5272 Eudicot View MSA
122048393 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121348032 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.12876 0.0 2.87866    
cufflinks 0.0976794 0.0 0.323214 Low Low
cufflinks 2.13353 0.0 5.07609   High
cufflinks 0.379376 0.0 1.06589 Low  
cufflinks 0.850192 0.0 2.22263    
cufflinks 0.0934096 0.0 0.318199 Low Low

0 Strain