Gene : Eucgr.G01909 E. grandis v2.0
Defline:  (1 of 2) PTHR31062:SF15 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 4-RELATED Genomic Order:  1514
Name:  ? Eucgr.G01909 Secondary Identifier:  ? PAC:32072705
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01909 0.5kb upstream 0.5kb upstream 2203 true Chr07: 37255371-37257573 Eucalyptus grandis
Eucgr.G01909 0.5kb upstream 0.5kb upstream 500 false Chr07: 37257074-37257573 Eucalyptus grandis
Eucgr.G01909 0.5kb downstream 0.5kb downstream 2203 true Chr07: 37254871-37257073 Eucalyptus grandis
Eucgr.G01909 0.5kb downstream 0.5kb downstream 500 false Chr07: 37254871-37255370 Eucalyptus grandis
Eucgr.G01909 1.0kb upstream 1.0kb upstream 2703 true Chr07: 37255371-37258073 Eucalyptus grandis
Eucgr.G01909 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37257074-37258073 Eucalyptus grandis
Eucgr.G01909 1.0kb downstream 1.0kb downstream 2703 true Chr07: 37254371-37257073 Eucalyptus grandis
Eucgr.G01909 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37254371-37255370 Eucalyptus grandis
Eucgr.G01909 2.0kb upstream 2.0kb upstream 3703 true Chr07: 37255371-37259073 Eucalyptus grandis
Eucgr.G01909 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37257074-37259073 Eucalyptus grandis
Eucgr.G01909 2.0kb downstream 2.0kb downstream 3703 true Chr07: 37253371-37257073 Eucalyptus grandis
Eucgr.G01909 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37253371-37255370 Eucalyptus grandis
Eucgr.G01909 5.0kb upstream 5.0kb upstream 6703 true Chr07: 37255371-37262073 Eucalyptus grandis
Eucgr.G01909 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37257074-37262073 Eucalyptus grandis
Eucgr.G01909 5.0kb downstream 5.0kb downstream 6703 true Chr07: 37250371-37257073 Eucalyptus grandis
Eucgr.G01909 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37250371-37255370 Eucalyptus grandis
Eucgr.G01909 10.0kb upstream 10.0kb upstream 11703 true Chr07: 37255371-37267073 Eucalyptus grandis
Eucgr.G01909 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37257074-37267073 Eucalyptus grandis
Eucgr.G01909 10.0kb downstream 10.0kb downstream 11703 true Chr07: 37245371-37257073 Eucalyptus grandis
Eucgr.G01909 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37245371-37255370 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063834 5270 Rosid View MSA
123740091 5271 Pentapetalae View MSA
122795119 5272 Eudicot View MSA
122042139 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.42043 0.0 4.21259    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.956974 0.0 2.98416   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.52768 0.0 4.50672    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain