Gene : Eucgr.G01880 E. grandis v2.0
Defline:  (1 of 3) PTHR23500:SF96 - MONOSACCHARIDE-SENSING PROTEIN 2 Genomic Order:  1463
Name:  ? Eucgr.G01880 Secondary Identifier:  ? PAC:32072150
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01880 0.5kb upstream 0.5kb upstream 5056 true Chr07: 35680354-35685409 Eucalyptus grandis
Eucgr.G01880 0.5kb upstream 0.5kb upstream 500 false Chr07: 35680354-35680853 Eucalyptus grandis
Eucgr.G01880 0.5kb downstream 0.5kb downstream 5056 true Chr07: 35680854-35685909 Eucalyptus grandis
Eucgr.G01880 0.5kb downstream 0.5kb downstream 500 false Chr07: 35685410-35685909 Eucalyptus grandis
Eucgr.G01880 1.0kb upstream 1.0kb upstream 5556 true Chr07: 35679854-35685409 Eucalyptus grandis
Eucgr.G01880 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35679854-35680853 Eucalyptus grandis
Eucgr.G01880 1.0kb downstream 1.0kb downstream 5556 true Chr07: 35680854-35686409 Eucalyptus grandis
Eucgr.G01880 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35685410-35686409 Eucalyptus grandis
Eucgr.G01880 2.0kb upstream 2.0kb upstream 6556 true Chr07: 35678854-35685409 Eucalyptus grandis
Eucgr.G01880 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35678854-35680853 Eucalyptus grandis
Eucgr.G01880 2.0kb downstream 2.0kb downstream 6556 true Chr07: 35680854-35687409 Eucalyptus grandis
Eucgr.G01880 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35685410-35687409 Eucalyptus grandis
Eucgr.G01880 5.0kb upstream 5.0kb upstream 9556 true Chr07: 35675854-35685409 Eucalyptus grandis
Eucgr.G01880 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35675854-35680853 Eucalyptus grandis
Eucgr.G01880 5.0kb downstream 5.0kb downstream 9556 true Chr07: 35680854-35690409 Eucalyptus grandis
Eucgr.G01880 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35685410-35690409 Eucalyptus grandis
Eucgr.G01880 10.0kb upstream 10.0kb upstream 14556 true Chr07: 35670854-35685409 Eucalyptus grandis
Eucgr.G01880 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35670854-35680853 Eucalyptus grandis
Eucgr.G01880 10.0kb downstream 10.0kb downstream 14556 true Chr07: 35680854-35695409 Eucalyptus grandis
Eucgr.G01880 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35685410-35695409 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070543 5270 Rosid View MSA
123752936 5271 Pentapetalae View MSA
122791973 5272 Eudicot View MSA
122045540 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350804 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.57967 0.0 8.7766   Low
cufflinks 43.0378 0.0 118.503 High High
cufflinks 4.55783 0.0 10.7794    
cufflinks 32.9182 0.0 83.8346    
cufflinks 26.9598 0.0 69.9407    
cufflinks 8.05704 0.0 20.6762    

0 Strain