Gene : Eucgr.G01893 E. grandis v2.0
Defline:  (1 of 1) PTHR10830 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT Genomic Order:  1175
Name:  ? Eucgr.G01893 Secondary Identifier:  ? PAC:32072658
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01893 0.5kb upstream 0.5kb upstream 8114 true Chr07: 28596194-28604307 Eucalyptus grandis
Eucgr.G01893 0.5kb upstream 0.5kb upstream 500 false Chr07: 28603808-28604307 Eucalyptus grandis
Eucgr.G01893 0.5kb downstream 0.5kb downstream 8114 true Chr07: 28595694-28603807 Eucalyptus grandis
Eucgr.G01893 0.5kb downstream 0.5kb downstream 500 false Chr07: 28595694-28596193 Eucalyptus grandis
Eucgr.G01893 1.0kb upstream 1.0kb upstream 8614 true Chr07: 28596194-28604807 Eucalyptus grandis
Eucgr.G01893 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28603808-28604807 Eucalyptus grandis
Eucgr.G01893 1.0kb downstream 1.0kb downstream 8614 true Chr07: 28595194-28603807 Eucalyptus grandis
Eucgr.G01893 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28595194-28596193 Eucalyptus grandis
Eucgr.G01893 2.0kb upstream 2.0kb upstream 9614 true Chr07: 28596194-28605807 Eucalyptus grandis
Eucgr.G01893 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28603808-28605807 Eucalyptus grandis
Eucgr.G01893 2.0kb downstream 2.0kb downstream 9614 true Chr07: 28594194-28603807 Eucalyptus grandis
Eucgr.G01893 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28594194-28596193 Eucalyptus grandis
Eucgr.G01893 5.0kb upstream 5.0kb upstream 12614 true Chr07: 28596194-28608807 Eucalyptus grandis
Eucgr.G01893 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28603808-28608807 Eucalyptus grandis
Eucgr.G01893 5.0kb downstream 5.0kb downstream 12614 true Chr07: 28591194-28603807 Eucalyptus grandis
Eucgr.G01893 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28591194-28596193 Eucalyptus grandis
Eucgr.G01893 10.0kb upstream 10.0kb upstream 17614 true Chr07: 28596194-28613807 Eucalyptus grandis
Eucgr.G01893 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28603808-28613807 Eucalyptus grandis
Eucgr.G01893 10.0kb downstream 10.0kb downstream 17614 true Chr07: 28586194-28603807 Eucalyptus grandis
Eucgr.G01893 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28586194-28596193 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068275 5270 Rosid View MSA
123750728 5271 Pentapetalae View MSA
122793398 5272 Eudicot View MSA
122043093 5273 Angiosperm View MSA
121346216 5274 Embryophyte View MSA
123424757 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.3694 0.0 122.883 High  
cufflinks 51.8366 0.0 114.984 High  
cufflinks 58.1084 0.0 129.11 High  
cufflinks 65.2641 0.0 145.563 High High
cufflinks 44.5832 0.0 98.6475 High Low
cufflinks 58.7787 0.0 130.563 High  

0 Strain