Gene : Eucgr.G01890 E. grandis v2.0
Defline:  (1 of 235) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1172
Name:  ? Eucgr.G01890 Secondary Identifier:  ? PAC:32072662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01890 0.5kb upstream 0.5kb upstream 1740 true Chr07: 28568061-28569800 Eucalyptus grandis
Eucgr.G01890 0.5kb upstream 0.5kb upstream 500 false Chr07: 28569301-28569800 Eucalyptus grandis
Eucgr.G01890 0.5kb downstream 0.5kb downstream 1740 true Chr07: 28567561-28569300 Eucalyptus grandis
Eucgr.G01890 0.5kb downstream 0.5kb downstream 500 false Chr07: 28567561-28568060 Eucalyptus grandis
Eucgr.G01890 1.0kb upstream 1.0kb upstream 2240 true Chr07: 28568061-28570300 Eucalyptus grandis
Eucgr.G01890 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28569301-28570300 Eucalyptus grandis
Eucgr.G01890 1.0kb downstream 1.0kb downstream 2240 true Chr07: 28567061-28569300 Eucalyptus grandis
Eucgr.G01890 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28567061-28568060 Eucalyptus grandis
Eucgr.G01890 2.0kb upstream 2.0kb upstream 3240 true Chr07: 28568061-28571300 Eucalyptus grandis
Eucgr.G01890 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28569301-28571300 Eucalyptus grandis
Eucgr.G01890 2.0kb downstream 2.0kb downstream 3240 true Chr07: 28566061-28569300 Eucalyptus grandis
Eucgr.G01890 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28566061-28568060 Eucalyptus grandis
Eucgr.G01890 5.0kb upstream 5.0kb upstream 6240 true Chr07: 28568061-28574300 Eucalyptus grandis
Eucgr.G01890 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28569301-28574300 Eucalyptus grandis
Eucgr.G01890 5.0kb downstream 5.0kb downstream 6240 true Chr07: 28563061-28569300 Eucalyptus grandis
Eucgr.G01890 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28563061-28568060 Eucalyptus grandis
Eucgr.G01890 10.0kb upstream 10.0kb upstream 11240 true Chr07: 28568061-28579300 Eucalyptus grandis
Eucgr.G01890 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28569301-28579300 Eucalyptus grandis
Eucgr.G01890 10.0kb downstream 10.0kb downstream 11240 true Chr07: 28558061-28569300 Eucalyptus grandis
Eucgr.G01890 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28558061-28568060 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063386 5270 Rosid View MSA
123751448 5271 Pentapetalae View MSA
122786309 5272 Eudicot View MSA
122045873 5273 Angiosperm View MSA
121310522 5274 Embryophyte View MSA
123347983 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0204298 0.0 0.170037 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0402136 0.0 0.244311 Low  
cufflinks 0.0543486 0.0 0.285732 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain