Gene : Eucgr.G02634 E. grandis v2.0
Defline:  (1 of 5) PF04434//PF10551 - SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  2145
Name:  ? Eucgr.G02634 Secondary Identifier:  ? PAC:32071583
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02634 0.5kb upstream 0.5kb upstream 5122 true Chr07: 46987743-46992864 Eucalyptus grandis
Eucgr.G02634 0.5kb upstream 0.5kb upstream 500 false Chr07: 46992365-46992864 Eucalyptus grandis
Eucgr.G02634 0.5kb downstream 0.5kb downstream 5122 true Chr07: 46987243-46992364 Eucalyptus grandis
Eucgr.G02634 0.5kb downstream 0.5kb downstream 500 false Chr07: 46987243-46987742 Eucalyptus grandis
Eucgr.G02634 1.0kb upstream 1.0kb upstream 5622 true Chr07: 46987743-46993364 Eucalyptus grandis
Eucgr.G02634 1.0kb upstream 1.0kb upstream 1000 false Chr07: 46992365-46993364 Eucalyptus grandis
Eucgr.G02634 1.0kb downstream 1.0kb downstream 5622 true Chr07: 46986743-46992364 Eucalyptus grandis
Eucgr.G02634 1.0kb downstream 1.0kb downstream 1000 false Chr07: 46986743-46987742 Eucalyptus grandis
Eucgr.G02634 2.0kb upstream 2.0kb upstream 6622 true Chr07: 46987743-46994364 Eucalyptus grandis
Eucgr.G02634 2.0kb upstream 2.0kb upstream 2000 false Chr07: 46992365-46994364 Eucalyptus grandis
Eucgr.G02634 2.0kb downstream 2.0kb downstream 6622 true Chr07: 46985743-46992364 Eucalyptus grandis
Eucgr.G02634 2.0kb downstream 2.0kb downstream 2000 false Chr07: 46985743-46987742 Eucalyptus grandis
Eucgr.G02634 5.0kb upstream 5.0kb upstream 9622 true Chr07: 46987743-46997364 Eucalyptus grandis
Eucgr.G02634 5.0kb upstream 5.0kb upstream 5000 false Chr07: 46992365-46997364 Eucalyptus grandis
Eucgr.G02634 5.0kb downstream 5.0kb downstream 9622 true Chr07: 46982743-46992364 Eucalyptus grandis
Eucgr.G02634 5.0kb downstream 5.0kb downstream 5000 false Chr07: 46982743-46987742 Eucalyptus grandis
Eucgr.G02634 10.0kb upstream 10.0kb upstream 14622 true Chr07: 46987743-47002364 Eucalyptus grandis
Eucgr.G02634 10.0kb upstream 10.0kb upstream 10000 false Chr07: 46992365-47002364 Eucalyptus grandis
Eucgr.G02634 10.0kb downstream 10.0kb downstream 14622 true Chr07: 46977743-46992364 Eucalyptus grandis
Eucgr.G02634 10.0kb downstream 10.0kb downstream 10000 false Chr07: 46977743-46987742 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064259 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.31727 0.0 5.83209    
cufflinks 3.02708 0.0 7.34884    
cufflinks 2.8602 0.0 7.01308    
cufflinks 1.53211 0.0 3.98349   Low
cufflinks 1.97883 0.0 5.02927    
cufflinks 2.82467 0.0 7.02044    

0 Strain